Analysis of interatomic Contacts of Structural Units in PDB entry:
3MZL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3MZL entry

There are 8 chains in PDB entry 3MZL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 2	ALA 292
B	TRP 376	GLY 745
C	VAL 2	ALA 292
D	TRP 376	GLY 745
E	VAL 2	ALA 292
F	TRP 376	GLY 745
G	VAL 2	ALA 292
H	TRP 376	GLY 745

There are 81 helices in PDB entry 3MZL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	B	415	424	Right-handed alpha
Helix 2	2	B	427	437	Right-handed alpha
Helix 3	3	B	440	457	Right-handed alpha
Helix 4	4	B	457	466	Right-handed alpha
Helix 5	5	B	508	520	Right-handed alpha
Helix 6	6	B	522	532	Right-handed alpha
Helix 7	7	B	535	545	Right-handed alpha
Helix 8	8	B	551	564	Right-handed alpha
Helix 9	9	B	567	578	Right-handed alpha
Helix 10	10	B	581	588	Right-handed alpha
Helix 11	11	B	592	604	Right-handed alpha
Helix 12	12	B	607	625	Right-handed alpha
Helix 13	13	B	627	638	Right-handed alpha
Helix 14	14	B	640	651	Right-handed alpha
Helix 15	15	B	651	657	Right-handed alpha
Helix 16	16	B	665	687	Right-handed alpha
Helix 17	17	B	696	712	Right-handed alpha
Helix 18	18	B	715	725	Right-handed alpha
Helix 19	19	B	730	745	Right-handed alpha
Helix 20	20	C	63	67	Right-handed 310
Helix 21	21	D	415	424	Right-handed alpha
Helix 22	22	D	427	437	Right-handed alpha
Helix 23	23	D	440	456	Right-handed alpha
Helix 24	24	D	457	466	Right-handed alpha
Helix 25	25	D	508	520	Right-handed alpha
Helix 26	26	D	522	532	Right-handed alpha
Helix 27	27	D	535	544	Right-handed alpha
Helix 28	28	D	550	563	Right-handed alpha
Helix 29	29	D	567	578	Right-handed alpha
Helix 30	30	D	581	588	Right-handed alpha
Helix 31	31	D	589	591	Right-handed 310
Helix 32	32	D	592	604	Right-handed alpha
Helix 33	33	D	607	625	Right-handed alpha
Helix 34	34	D	627	638	Right-handed alpha
Helix 35	35	D	640	651	Right-handed alpha
Helix 36	36	D	651	661	Right-handed alpha
Helix 37	37	D	665	686	Right-handed alpha
Helix 38	38	D	696	713	Right-handed alpha
Helix 39	39	D	715	724	Right-handed alpha
Helix 40	40	D	730	745	Right-handed alpha
Helix 41	41	E	63	67	Right-handed 310
Helix 42	42	E	109	113	Right-handed 310
Helix 43	43	F	415	424	Right-handed alpha
Helix 44	44	F	427	437	Right-handed alpha
Helix 45	45	F	440	456	Right-handed alpha
Helix 46	46	F	457	466	Right-handed alpha
Helix 47	47	F	508	520	Right-handed alpha
Helix 48	48	F	522	532	Right-handed alpha
Helix 49	49	F	535	544	Right-handed alpha
Helix 50	50	F	550	563	Right-handed alpha
Helix 51	51	F	567	578	Right-handed alpha
Helix 52	52	F	581	588	Right-handed alpha
Helix 53	53	F	592	604	Right-handed alpha
Helix 54	54	F	607	626	Right-handed alpha
Helix 55	55	F	627	637	Right-handed alpha
Helix 56	56	F	640	651	Right-handed alpha
Helix 57	57	F	651	657	Right-handed alpha
Helix 58	58	F	665	686	Right-handed alpha
Helix 59	59	F	696	712	Right-handed alpha
Helix 60	60	F	715	724	Right-handed alpha
Helix 61	61	F	730	745	Right-handed alpha
Helix 62	62	H	415	425	Right-handed alpha
Helix 63	63	H	427	437	Right-handed alpha
Helix 64	64	H	440	457	Right-handed alpha
Helix 65	65	H	457	466	Right-handed alpha
Helix 66	66	H	508	520	Right-handed alpha
Helix 67	67	H	522	533	Right-handed alpha
Helix 68	68	H	536	547	Right-handed alpha
Helix 69	69	H	550	561	Right-handed alpha
Helix 70	70	H	567	578	Right-handed alpha
Helix 71	71	H	580	588	Right-handed alpha
Helix 72	72	H	589	591	Right-handed 310
Helix 73	73	H	592	604	Right-handed alpha
Helix 74	74	H	607	625	Right-handed alpha
Helix 75	75	H	627	638	Right-handed alpha
Helix 76	76	H	640	651	Right-handed alpha
Helix 77	77	H	651	661	Right-handed alpha
Helix 78	78	H	665	687	Right-handed alpha
Helix 79	79	H	696	713	Right-handed alpha
Helix 80	80	H	715	724	Right-handed alpha
Helix 81	81	H	730	745	Right-handed alpha

There are 28 sheets in PDB entry 3MZL. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3	4	first strand
Strand 2	B	402	405	anti-parallel
Strand 3	B	391	395	anti-parallel
Strand 4	B	385	387	anti-parallel

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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	12	17	first strand
Strand 2	A	23	28	anti-parallel
Strand 3	A	33	38	anti-parallel
Strand 4	A	43	49	anti-parallel

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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	56	61	first strand
Strand 2	A	69	74	anti-parallel
Strand 3	A	79	85	anti-parallel
Strand 4	A	88	95	anti-parallel

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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	102	107	first strand
Strand 2	A	115	120	anti-parallel
Strand 3	A	124	129	anti-parallel
Strand 4	A	139	142	anti-parallel

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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	148	153	first strand
Strand 2	A	172	177	anti-parallel
Strand 3	A	182	188	anti-parallel
Strand 4	A	193	200	anti-parallel

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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	207	209	first strand
Strand 2	A	220	226	anti-parallel
Strand 3	A	231	236	anti-parallel
Strand 4	A	244	247	anti-parallel

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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	257	262	first strand
Strand 2	A	269	273	anti-parallel
Strand 3	A	278	283	anti-parallel
Strand 4	A	289	291	anti-parallel

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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	4	first strand
Strand 2	D	402	405	anti-parallel
Strand 3	D	391	395	anti-parallel
Strand 4	D	385	387	anti-parallel

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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	12	17	first strand
Strand 2	C	23	28	anti-parallel
Strand 3	C	32	38	anti-parallel
Strand 4	C	43	50	anti-parallel

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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	56	61	first strand
Strand 2	C	69	74	anti-parallel
Strand 3	C	79	85	anti-parallel
Strand 4	C	88	95	anti-parallel

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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	102	107	first strand
Strand 2	C	115	120	anti-parallel
Strand 3	C	124	129	anti-parallel
Strand 4	C	139	142	anti-parallel

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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	148	153	first strand
Strand 2	C	172	177	anti-parallel
Strand 3	C	182	188	anti-parallel
Strand 4	C	193	200	anti-parallel

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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	207	212	first strand
Strand 2	C	220	226	anti-parallel
Strand 3	C	231	236	anti-parallel
Strand 4	C	244	247	anti-parallel

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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	257	262	first strand
Strand 2	C	269	273	anti-parallel
Strand 3	C	278	283	anti-parallel
Strand 4	C	289	291	anti-parallel

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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	3	4	first strand
Strand 2	F	402	405	anti-parallel
Strand 3	F	391	395	anti-parallel
Strand 4	F	385	387	anti-parallel

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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	12	17	first strand
Strand 2	E	24	28	anti-parallel
Strand 3	E	32	38	anti-parallel
Strand 4	E	43	50	anti-parallel

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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	56	61	first strand
Strand 2	E	69	74	anti-parallel
Strand 3	E	79	85	anti-parallel
Strand 4	E	88	95	anti-parallel

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There are 4 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	102	107	first strand
Strand 2	E	115	120	anti-parallel
Strand 3	E	124	129	anti-parallel
Strand 4	E	139	142	anti-parallel

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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	148	153	first strand
Strand 2	E	172	177	anti-parallel
Strand 3	E	182	188	anti-parallel
Strand 4	E	193	200	anti-parallel

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There are 4 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	207	212	first strand
Strand 2	E	220	226	anti-parallel
Strand 3	E	231	236	anti-parallel
Strand 4	E	244	247	anti-parallel

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There are 4 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	257	262	first strand
Strand 2	E	269	273	anti-parallel
Strand 3	E	278	283	anti-parallel
Strand 4	E	289	291	anti-parallel

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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	3	4	first strand
Strand 2	H	402	405	anti-parallel
Strand 3	H	391	395	anti-parallel
Strand 4	H	385	387	anti-parallel

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There are 4 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	12	17	first strand
Strand 2	G	23	28	anti-parallel
Strand 3	G	33	38	anti-parallel
Strand 4	G	43	49	anti-parallel

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There are 4 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	56	61	first strand
Strand 2	G	69	74	anti-parallel
Strand 3	G	79	85	anti-parallel
Strand 4	G	88	95	anti-parallel

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There are 4 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	102	107	first strand
Strand 2	G	115	120	anti-parallel
Strand 3	G	124	129	anti-parallel
Strand 4	G	139	142	anti-parallel

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There are 4 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	148	153	first strand
Strand 2	G	172	177	anti-parallel
Strand 3	G	182	188	anti-parallel
Strand 4	G	193	200	anti-parallel

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There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	207	212	first strand
Strand 2	G	220	226	anti-parallel
Strand 3	G	231	236	anti-parallel
Strand 4	G	244	247	anti-parallel

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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	257	262	first strand
Strand 2	G	269	273	anti-parallel
Strand 3	G	278	283	anti-parallel
Strand 4	G	289	291	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3MZL

Analysis of interatomic Contacts of Structural Units in PDB entry:
3MZL