Analysis of interatomic Contacts of Structural Units in PDB entry:
3N0A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3N0A entry

There is 1 chain in PDB entry 3N0A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 53LEU 399
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 3N0A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
88 100Right-handed alpha
Helix 2
2
A
113 117Right-handed 310
Helix 3
3
A
118 120Right-handed 310
Helix 4
4
A
134 152Right-handed alpha
Helix 5
5
A
165 179Right-handed alpha
Helix 6
6
A
184 196Right-handed alpha
Helix 7
7
A
202 217Right-handed alpha
Helix 8
8
A
267 271Right-handed 310
Helix 9
9
A
277 279Right-handed 310
Helix 10
10
A
325 327Right-handed 310
Helix 11
11
A
339 341Right-handed 310
Helix 12
12
A
346 350Right-handed 310
Helix 13
13
A
373 378Right-handed 310
Helix 14
14
A
384 389Right-handed 310
Helix 15
15
A
391 399Right-handed alpha
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There are 4 sheets in PDB entry 3N0A. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 57first strand
Strand 2
A
62 65anti-parallel
Strand 3
A
70 74anti-parallel
Strand 4
A
156 161parallel
Strand 5
A
103 107parallel
Strand 6
A
122 124parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
281 289first strand
Strand 2
A
228 236anti-parallel
Strand 3
A
355 362anti-parallel
Strand 4
A
333 337anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 248first strand
Strand 2
A
274 275anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 263first strand
Strand 2
A
250 256anti-parallel
Strand 3
A
292 304anti-parallel
Strand 4
A
310 323anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il