Analysis of interatomic Contacts of Structural Units in PDB entry:
3N0L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3N0L entry

There are 2 chains in PDB entry 3N0L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN -1PHE 414
B
 SER -2PHE 414
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 3N0L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
0 7Right-handed alpha
Helix 2
2
A
7 24Right-handed alpha
Helix 3
3
A
35 43Right-handed alpha
Helix 4
4
A
44 49Right-handed 310
Helix 5
5
A
63 82Right-handed alpha
Helix 6
6
A
92 105Right-handed alpha
Helix 7
7
A
149 161Right-handed alpha
Helix 8
8
A
177 189Right-handed alpha
Helix 9
9
A
199 205Right-handed alpha
Helix 10
10
A
238 250Right-handed alpha
Helix 11
11
A
258 273Right-handed alpha
Helix 12
12
A
274 298Right-handed alpha
Helix 13
13
A
304 306Right-handed 310
Helix 14
14
A
322 333Right-handed alpha
Helix 15
15
A
359 365Right-handed alpha
Helix 16
16
A
368 385Right-handed alpha
Helix 17
17
A
388 404Right-handed alpha
Helix 18
18
B
0 7Right-handed alpha
Helix 19
19
B
7 24Right-handed alpha
Helix 20
20
B
35 43Right-handed alpha
Helix 21
21
B
44 49Right-handed 310
Helix 22
22
B
63 82Right-handed alpha
Helix 23
23
B
92 105Right-handed alpha
Helix 24
24
B
149 161Right-handed alpha
Helix 25
25
B
177 188Right-handed alpha
Helix 26
26
B
199 205Right-handed alpha
Helix 27
27
B
238 250Right-handed alpha
Helix 28
28
B
258 273Right-handed alpha
Helix 29
29
B
274 298Right-handed alpha
Helix 30
30
B
304 306Right-handed 310
Helix 31
31
B
322 333Right-handed alpha
Helix 32
32
B
359 365Right-handed alpha
Helix 33
33
B
368 385Right-handed alpha
Helix 34
34
B
388 404Right-handed alpha
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There are 8 sheets in PDB entry 3N0L. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 26first strand
Strand 2
A
335 336parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 54first strand
Strand 2
A
57 58anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 87first strand
Strand 2
A
232 236anti-parallel
Strand 3
A
217 221anti-parallel
Strand 4
A
191 195parallel
Strand 5
A
164 167parallel
Strand 6
A
110 114parallel
Strand 7
A
136 140parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 302first strand
Strand 2
A
311 315anti-parallel
Strand 3
A
354 358anti-parallel
Strand 4
A
338 339anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
25 26first strand
Strand 2
B
335 336parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 54first strand
Strand 2
B
57 58anti-parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
85 87first strand
Strand 2
B
232 236anti-parallel
Strand 3
B
217 221anti-parallel
Strand 4
B
191 195parallel
Strand 5
B
164 167parallel
Strand 6
B
110 114parallel
Strand 7
B
136 140parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
301 302first strand
Strand 2
B
311 315anti-parallel
Strand 3
B
354 358anti-parallel
Strand 4
B
338 339anti-parallel
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