Analysis of interatomic Contacts of Structural Units in PDB entry:
3N0W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3N0W entry

There are 2 chains in PDB entry 3N0W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 26LYS 399
B
 GLN 26LYS 399
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 3N0W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
43 58Right-handed alpha
Helix 2
2
A
77 92Right-handed alpha
Helix 3
3
A
102 117Right-handed alpha
Helix 4
4
A
145 160Right-handed alpha
Helix 5
5
A
172 190Right-handed alpha
Helix 6
6
A
206 217Right-handed alpha
Helix 7
7
A
226 240Right-handed alpha
Helix 8
8
A
255 263Right-handed alpha
Helix 9
9
A
263 268Right-handed alpha
Helix 10
10
A
281 296Right-handed alpha
Helix 11
11
A
300 321Right-handed alpha
Helix 12
12
A
324 333Right-handed alpha
Helix 13
13
A
364 368Right-handed 310
Helix 14
14
A
382 388Right-handed alpha
Helix 15
15
A
389 393Right-handed 310
Helix 16
16
A
395 399Right-handed 310
Helix 17
17
B
43 57Right-handed alpha
Helix 18
18
B
77 91Right-handed alpha
Helix 19
19
B
102 117Right-handed alpha
Helix 20
20
B
145 160Right-handed alpha
Helix 21
21
B
172 189Right-handed alpha
Helix 22
22
B
206 216Right-handed alpha
Helix 23
23
B
226 239Right-handed alpha
Helix 24
24
B
255 263Right-handed alpha
Helix 25
25
B
263 268Right-handed alpha
Helix 26
26
B
281 296Right-handed alpha
Helix 27
27
B
300 321Right-handed alpha
Helix 28
28
B
324 333Right-handed alpha
Helix 29
29
B
364 368Right-handed 310
Helix 30
30
B
382 388Right-handed alpha
Helix 31
31
B
389 393Right-handed 310
Helix 32
32
B
395 399Right-handed 310
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There are 10 sheets in PDB entry 3N0W. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 73first strand
Strand 2
A
28 33parallel
Strand 3
A
96 99parallel
Strand 4
A
119 122parallel
Strand 5
A
139 141parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 62first strand
Strand 2
A
65 66anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 199first strand
Strand 2
A
164 170parallel
Strand 3
A
220 223parallel
Strand 4
A
248 250parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
271 274first strand
Strand 2
A
357 362anti-parallel
Strand 3
A
375 381anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
346 347first strand
Strand 2
A
353 354anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
68 73first strand
Strand 2
B
28 33parallel
Strand 3
B
96 99parallel
Strand 4
B
119 122parallel
Strand 5
B
139 141parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 62first strand
Strand 2
B
65 66anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
192 199first strand
Strand 2
B
164 170parallel
Strand 3
B
220 223parallel
Strand 4
B
248 250parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
271 274first strand
Strand 2
B
357 362anti-parallel
Strand 3
B
375 381anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
346 347first strand
Strand 2
B
353 354anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il