Analysis of interatomic Contacts of Structural Units in PDB entry:
3N15


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3N15 entry

There is 1 chain in PDB entry 3N15 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 31LEU 356
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 3N15. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
51 55Right-handed 310
Helix 2
2
A
84 98Right-handed alpha
Helix 3
3
A
117 136Right-handed alpha
Helix 4
4
A
162 177Right-handed alpha
Helix 5
5
A
190 199Right-handed 310
Helix 6
6
A
208 216Right-handed alpha
Helix 7
7
A
244 257Right-handed alpha
Helix 8
8
A
273 275Right-handed 310
Helix 9
9
A
284 288Right-handed 310
Helix 10
10
A
295 309Right-handed alpha
Helix 11
11
A
334 341Right-handed alpha
Helix 12
12
A
343 356Right-handed alpha
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There are 3 sheets in PDB entry 3N15. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 77first strand
Strand 2
A
61 69anti-parallel
Strand 3
A
101 108parallel
Strand 4
A
139 144parallel
Strand 5
A
184 187parallel
Strand 6
A
221 225parallel
Strand 7
A
277 282parallel
Strand 8
A
329 333parallel
Strand 9
A
35 41parallel
Strand 10
A
61 69parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
231 233first strand
Strand 2
A
239 241anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 261first strand
Strand 2
A
264 270anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il