Analysis of interatomic Contacts of Structural Units in PDB entry:
3N6Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3N6Q entry

There are 8 chains in PDB entry 3N6Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 2ASN 338
B
 VAL 2ASN 338
C
 VAL 2ASN 338
D
 VAL 2LEU 339
E
 VAL 2LEU 337
F
 VAL 2ASN 338
G
 VAL 2ASN 338
H
 VAL 2ILE 332
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are111 helices in PDB entry 3N6Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
41 55Right-handed alpha
Helix 2
2
A
71 85Right-handed alpha
Helix 3
3
A
88 92Right-handed 310
Helix 4
4
A
112 128Right-handed alpha
Helix 5
5
A
145 159Right-handed alpha
Helix 6
6
A
171 184Right-handed alpha
Helix 7
7
A
201 206Right-handed alpha
Helix 8
8
A
207 216Right-handed alpha
Helix 9
9
A
225 232Right-handed 310
Helix 10
10
A
260 277Right-handed alpha
Helix 11
11
A
280 290Right-handed alpha
Helix 12
12
A
304 313Right-handed alpha
Helix 13
13
A
314 317Right-handed 310
Helix 14
14
A
321 335Right-handed alpha
Helix 15
15
B
41 55Right-handed alpha
Helix 16
16
B
71 85Right-handed alpha
Helix 17
17
B
88 92Right-handed 310
Helix 18
18
B
112 128Right-handed alpha
Helix 19
19
B
145 159Right-handed alpha
Helix 20
20
B
171 184Right-handed alpha
Helix 21
21
B
201 206Right-handed alpha
Helix 22
22
B
207 215Right-handed alpha
Helix 23
23
B
225 229Right-handed 310
Helix 24
24
B
260 277Right-handed alpha
Helix 25
25
B
280 290Right-handed alpha
Helix 26
26
B
304 313Right-handed alpha
Helix 27
27
B
314 317Right-handed 310
Helix 28
28
B
321 335Right-handed alpha
Helix 29
29
C
41 55Right-handed alpha
Helix 30
30
C
71 85Right-handed alpha
Helix 31
31
C
88 92Right-handed 310
Helix 32
32
C
112 128Right-handed alpha
Helix 33
33
C
145 159Right-handed alpha
Helix 34
34
C
171 184Right-handed alpha
Helix 35
35
C
201 206Right-handed alpha
Helix 36
36
C
207 215Right-handed alpha
Helix 37
37
C
225 229Right-handed 310
Helix 38
38
C
260 277Right-handed alpha
Helix 39
39
C
280 290Right-handed alpha
Helix 40
40
C
304 313Right-handed alpha
Helix 41
41
C
314 317Right-handed 310
Helix 42
42
C
321 336Right-handed alpha
Helix 43
43
D
41 55Right-handed alpha
Helix 44
44
D
71 85Right-handed alpha
Helix 45
45
D
88 92Right-handed 310
Helix 46
46
D
112 128Right-handed alpha
Helix 47
47
D
145 159Right-handed alpha
Helix 48
48
D
171 185Right-handed alpha
Helix 49
49
D
201 206Right-handed alpha
Helix 50
50
D
207 215Right-handed alpha
Helix 51
51
D
225 229Right-handed 310
Helix 52
52
D
260 277Right-handed alpha
Helix 53
53
D
280 290Right-handed alpha
Helix 54
54
D
304 313Right-handed alpha
Helix 55
55
D
314 317Right-handed 310
Helix 56
56
D
321 335Right-handed alpha
Helix 57
57
E
41 55Right-handed alpha
Helix 58
58
E
71 85Right-handed alpha
Helix 59
59
E
88 92Right-handed 310
Helix 60
60
E
112 128Right-handed alpha
Helix 61
61
E
145 159Right-handed alpha
Helix 62
62
E
171 184Right-handed alpha
Helix 63
63
E
201 206Right-handed alpha
Helix 64
64
E
207 215Right-handed alpha
Helix 65
65
E
225 229Right-handed 310
Helix 66
66
E
261 278Right-handed alpha
Helix 67
67
E
280 290Right-handed alpha
Helix 68
68
E
304 313Right-handed alpha
Helix 69
69
E
314 317Right-handed 310
Helix 70
70
E
321 333Right-handed alpha
Helix 71
71
F
41 55Right-handed alpha
Helix 72
72
F
71 85Right-handed alpha
Helix 73
73
F
88 92Right-handed 310
Helix 74
74
F
112 128Right-handed alpha
Helix 75
75
F
145 159Right-handed alpha
Helix 76
76
F
171 185Right-handed alpha
Helix 77
77
F
201 206Right-handed alpha
Helix 78
78
F
207 216Right-handed alpha
Helix 79
79
F
225 229Right-handed 310
Helix 80
80
F
260 277Right-handed alpha
Helix 81
81
F
280 290Right-handed alpha
Helix 82
82
F
304 312Right-handed alpha
Helix 83
83
F
313 317Right-handed 310
Helix 84
84
F
321 335Right-handed alpha
Helix 85
85
G
41 55Right-handed alpha
Helix 86
86
G
71 85Right-handed alpha
Helix 87
87
G
88 92Right-handed 310
Helix 88
88
G
112 128Right-handed alpha
Helix 89
89
G
145 159Right-handed alpha
Helix 90
90
G
171 184Right-handed alpha
Helix 91
91
G
201 206Right-handed alpha
Helix 92
92
G
207 215Right-handed alpha
Helix 93
93
G
225 229Right-handed 310
Helix 94
94
G
260 277Right-handed alpha
Helix 95
95
G
280 290Right-handed alpha
Helix 96
96
G
304 312Right-handed alpha
Helix 97
97
G
313 317Right-handed 310
Helix 98
98
G
321 335Right-handed alpha
Helix 99
99
H
41 55Right-handed alpha
Helix 100
100
H
71 85Right-handed alpha
Helix 101
101
H
88 92Right-handed 310
Helix 102
102
H
112 128Right-handed alpha
Helix 103
103
H
145 159Right-handed alpha
Helix 104
104
H
171 184Right-handed alpha
Helix 105
105
H
201 206Right-handed alpha
Helix 106
106
H
207 215Right-handed alpha
Helix 107
107
H
262 278Right-handed alpha
Helix 108
108
H
280 290Right-handed alpha
Helix 109
109
H
304 312Right-handed alpha
Helix 110
110
H
313 317Right-handed 310
Helix 111
111
H
321 332Right-handed alpha
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There are 16 sheets in PDB entry 3N6Q. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 17first strand
Strand 2
A
24 26anti-parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 31first strand
Strand 2
A
59 61parallel
Strand 3
A
93 98parallel
Strand 4
A
132 137parallel
Strand 5
A
162 168parallel
Strand 6
A
191 193parallel
Strand 7
A
218 221parallel
Strand 8
A
297 300parallel
Strand 9
A
28 31parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 17first strand
Strand 2
B
24 26anti-parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 31first strand
Strand 2
B
59 61parallel
Strand 3
B
93 98parallel
Strand 4
B
132 137parallel
Strand 5
B
162 168parallel
Strand 6
B
191 193parallel
Strand 7
B
218 221parallel
Strand 8
B
297 300parallel
Strand 9
B
28 31parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
15 17first strand
Strand 2
C
24 26anti-parallel
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There are 9 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
28 31first strand
Strand 2
C
59 61parallel
Strand 3
C
93 98parallel
Strand 4
C
132 137parallel
Strand 5
C
162 168parallel
Strand 6
C
191 193parallel
Strand 7
C
218 221parallel
Strand 8
C
297 300parallel
Strand 9
C
28 31parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
15 17first strand
Strand 2
D
24 26anti-parallel
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There are 9 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
28 31first strand
Strand 2
D
59 61parallel
Strand 3
D
93 98parallel
Strand 4
D
132 137parallel
Strand 5
D
162 168parallel
Strand 6
D
191 193parallel
Strand 7
D
218 221parallel
Strand 8
D
297 300parallel
Strand 9
D
28 31parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
15 17first strand
Strand 2
E
24 26anti-parallel
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There are 9 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
28 31first strand
Strand 2
E
59 61parallel
Strand 3
E
93 98parallel
Strand 4
E
132 137parallel
Strand 5
E
162 168parallel
Strand 6
E
191 193parallel
Strand 7
E
218 221parallel
Strand 8
E
297 300parallel
Strand 9
E
28 31parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
15 17first strand
Strand 2
F
24 26anti-parallel
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There are 9 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
28 31first strand
Strand 2
F
59 61parallel
Strand 3
F
93 98parallel
Strand 4
F
132 137parallel
Strand 5
F
162 168parallel
Strand 6
F
191 193parallel
Strand 7
F
218 221parallel
Strand 8
F
297 300parallel
Strand 9
F
28 31parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
15 17first strand
Strand 2
G
24 26anti-parallel
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There are 9 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
28 31first strand
Strand 2
G
59 61parallel
Strand 3
G
93 98parallel
Strand 4
G
132 137parallel
Strand 5
G
162 168parallel
Strand 6
G
189 193parallel
Strand 7
G
218 221parallel
Strand 8
G
297 300parallel
Strand 9
G
28 31parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
15 17first strand
Strand 2
H
24 26anti-parallel
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There are 9 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
28 31first strand
Strand 2
H
59 61parallel
Strand 3
H
93 98parallel
Strand 4
H
132 137parallel
Strand 5
H
162 168parallel
Strand 6
H
191 193parallel
Strand 7
H
218 221parallel
Strand 8
H
297 300parallel
Strand 9
H
28 31parallel
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