Analysis of interatomic Contacts of Structural Units in PDB entry:
3N71


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3N71 entry

There is 1 chain in PDB entry 3N71 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASN 468
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 3N71. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
45 48Right-handed 310
Helix 2
2
A
75 97Right-handed alpha
Helix 3
3
A
101 117Right-handed alpha
Helix 4
4
A
128 132Right-handed 310
Helix 5
5
A
135 139Right-handed 310
Helix 6
6
A
140 158Right-handed alpha
Helix 7
7
A
166 179Right-handed alpha
Helix 8
8
A
200 204Right-handed 310
Helix 9
9
A
227 231Right-handed 310
Helix 10
10
A
258 271Right-handed alpha
Helix 11
11
A
276 282Right-handed alpha
Helix 12
12
A
284 289Right-handed alpha
Helix 13
13
A
298 321Right-handed alpha
Helix 14
14
A
324 340Right-handed alpha
Helix 15
15
A
347 364Right-handed alpha
Helix 16
16
A
366 385Right-handed alpha
Helix 17
17
A
389 406Right-handed alpha
Helix 18
18
A
408 427Right-handed alpha
Helix 19
19
A
431 466Right-handed alpha
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There are 5 sheets in PDB entry 3N71. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 13first strand
Strand 2
A
19 23anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 36first strand
Strand 2
A
233 238anti-parallel
Strand 3
A
212 217anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 43first strand
Strand 2
A
192 197anti-parallel
Strand 3
A
181 185anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 64first strand
Strand 2
A
72 73anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
205 206first strand
Strand 2
A
249 250parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il