Analysis of interatomic Contacts of Structural Units in PDB entry:
3N7M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3N7M entry

There is 1 chain in PDB entry 3N7M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 863SER 1284
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 3N7M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
863 866Right-handed 310
Helix 2
2
A
922 931Right-handed alpha
Helix 3
3
A
1077 1088Right-handed alpha
Helix 4
4
A
1114 1116Right-handed 310
Helix 5
5
A
1199 1207Right-handed alpha
Helix 6
6
A
1269 1276Right-handed 310
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There are 5 sheets in PDB entry 3N7M. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
878 881first strand
Strand 2
A
868 875anti-parallel
Strand 3
A
1063 1072anti-parallel
Strand 4
A
905 908anti-parallel
Strand 5
A
896 897anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
878 881first strand
Strand 2
A
868 875anti-parallel
Strand 3
A
1063 1072anti-parallel
Strand 4
A
933 943anti-parallel
Strand 5
A
1003 1011anti-parallel
Strand 6
A
1015 1020anti-parallel
Strand 7
A
1023 1029anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
888 892first strand
Strand 2
A
916 920anti-parallel
Strand 3
A
1041 1048anti-parallel
Strand 4
A
952 958anti-parallel
Strand 5
A
963 969anti-parallel
Strand 6
A
972 978anti-parallel
Strand 7
A
984 990anti-parallel
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There are 13 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1163 1169first strand
Strand 2
A
1174 1179anti-parallel
Strand 3
A
1190 1196anti-parallel
Strand 4
A
1255 1263anti-parallel
Strand 5
A
1234 1245anti-parallel
Strand 6
A
1219 1227anti-parallel
Strand 7
A
1163 1169first strand
Strand 8
A
1144 1150anti-parallel
Strand 9
A
1107 1112anti-parallel
Strand 10
A
1278 1282anti-parallel
Strand 11
A
1219 1227anti-parallel
Strand 12
A
1209 1216anti-parallel
Strand 13
A
1219 1227anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1118 1123first strand
Strand 2
A
1126 1131anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il