Analysis of interatomic Contacts of Structural Units in PDB entry:
3N86

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3N86 entry

There are 24 chains in PDB entry 3N86 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 3	HIS 143
B	LEU 3	HIS 143
C	LEU 3	HIS 143
D	LEU 3	HIS 143
E	LEU 3	HIS 143
F	LEU 3	HIS 143
G	LEU 3	HIS 143
H	LEU 3	HIS 143
I	LEU 3	HIS 143
J	SER 1	HIS 143
K	GLU 2	HIS 143
L	LEU 3	HIS 143
M	LEU 3	HIS 143
N	LEU 3	HIS 143
O	LEU 3	HIS 143
P	GLU 2	HIS 143
Q	LEU 3	HIS 143
R	GLU 2	HIS 143
S	LEU 3	HIS 143
T	LEU 3	HIS 143
U	LEU 3	HIS 143
V	MET 0	HIS 143
W	SER 1	HIS 143
X	LEU 3	HIS 143

There are231 helices in PDB entry 3N86. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	12	16	Right-handed 310
Helix 2	2	A	20	25	Right-handed alpha
Helix 3	3	A	28	44	Right-handed alpha
Helix 4	4	A	54	69	Right-handed alpha
Helix 5	5	A	76	82	Right-handed 310
Helix 6	6	A	83	92	Right-handed alpha
Helix 7	7	A	104	108	Right-handed 310
Helix 8	8	A	109	114	Right-handed 310
Helix 9	9	A	130	142	Right-handed alpha
Helix 10	10	B	12	16	Right-handed 310
Helix 11	11	B	20	25	Right-handed alpha
Helix 12	12	B	28	44	Right-handed alpha
Helix 13	13	B	54	69	Right-handed alpha
Helix 14	14	B	76	82	Right-handed 310
Helix 15	15	B	83	91	Right-handed alpha
Helix 16	16	B	104	108	Right-handed 310
Helix 17	17	B	109	114	Right-handed 310
Helix 18	18	B	117	121	Right-handed 310
Helix 19	19	B	130	142	Right-handed alpha
Helix 20	20	C	12	16	Right-handed 310
Helix 21	21	C	20	25	Right-handed alpha
Helix 22	22	C	28	44	Right-handed alpha
Helix 23	23	C	54	68	Right-handed alpha
Helix 24	24	C	76	82	Right-handed 310
Helix 25	25	C	83	92	Right-handed alpha
Helix 26	26	C	104	108	Right-handed 310
Helix 27	27	C	109	114	Right-handed 310
Helix 28	28	C	117	121	Right-handed 310
Helix 29	29	C	130	143	Right-handed alpha
Helix 30	30	D	12	16	Right-handed 310
Helix 31	31	D	20	25	Right-handed alpha
Helix 32	32	D	28	43	Right-handed alpha
Helix 33	33	D	54	69	Right-handed alpha
Helix 34	34	D	76	82	Right-handed 310
Helix 35	35	D	83	91	Right-handed alpha
Helix 36	36	D	104	108	Right-handed 310
Helix 37	37	D	109	114	Right-handed 310
Helix 38	38	D	117	121	Right-handed 310
Helix 39	39	D	130	143	Right-handed alpha
Helix 40	40	E	12	16	Right-handed 310
Helix 41	41	E	20	25	Right-handed alpha
Helix 42	42	E	28	44	Right-handed alpha
Helix 43	43	E	54	69	Right-handed alpha
Helix 44	44	E	76	82	Right-handed 310
Helix 45	45	E	83	92	Right-handed alpha
Helix 46	46	E	104	108	Right-handed 310
Helix 47	47	E	109	114	Right-handed 310
Helix 48	48	E	117	121	Right-handed 310
Helix 49	49	E	130	142	Right-handed alpha
Helix 50	50	F	12	16	Right-handed 310
Helix 51	51	F	20	25	Right-handed alpha
Helix 52	52	F	28	43	Right-handed alpha
Helix 53	53	F	54	69	Right-handed alpha
Helix 54	54	F	76	82	Right-handed 310
Helix 55	55	F	83	92	Right-handed alpha
Helix 56	56	F	104	108	Right-handed 310
Helix 57	57	F	109	114	Right-handed 310
Helix 58	58	F	117	121	Right-handed 310
Helix 59	59	F	130	143	Right-handed alpha
Helix 60	60	G	12	16	Right-handed 310
Helix 61	61	G	20	25	Right-handed alpha
Helix 62	62	G	28	44	Right-handed alpha
Helix 63	63	G	54	69	Right-handed alpha
Helix 64	64	G	76	82	Right-handed 310
Helix 65	65	G	83	91	Right-handed alpha
Helix 66	66	G	104	108	Right-handed 310
Helix 67	67	G	109	114	Right-handed 310
Helix 68	68	G	117	121	Right-handed 310
Helix 69	69	G	130	142	Right-handed alpha
Helix 70	70	H	12	16	Right-handed 310
Helix 71	71	H	20	25	Right-handed alpha
Helix 72	72	H	28	44	Right-handed alpha
Helix 73	73	H	54	69	Right-handed alpha
Helix 74	74	H	76	82	Right-handed 310
Helix 75	75	H	83	92	Right-handed alpha
Helix 76	76	H	104	108	Right-handed 310
Helix 77	77	H	109	114	Right-handed 310
Helix 78	78	H	117	121	Right-handed 310
Helix 79	79	H	130	143	Right-handed alpha
Helix 80	80	I	12	16	Right-handed 310
Helix 81	81	I	20	25	Right-handed alpha
Helix 82	82	I	28	43	Right-handed alpha
Helix 83	83	I	54	69	Right-handed alpha
Helix 84	84	I	76	82	Right-handed 310
Helix 85	85	I	83	91	Right-handed alpha
Helix 86	86	I	104	108	Right-handed 310
Helix 87	87	I	109	114	Right-handed 310
Helix 88	88	I	117	121	Right-handed 310
Helix 89	89	I	130	142	Right-handed alpha
Helix 90	90	J	12	16	Right-handed 310
Helix 91	91	J	20	25	Right-handed alpha
Helix 92	92	J	28	43	Right-handed alpha
Helix 93	93	J	54	69	Right-handed alpha
Helix 94	94	J	76	82	Right-handed 310
Helix 95	95	J	83	92	Right-handed alpha
Helix 96	96	J	109	114	Right-handed 310
Helix 97	97	J	130	143	Right-handed alpha
Helix 98	98	K	12	16	Right-handed 310
Helix 99	99	K	20	25	Right-handed alpha
Helix 100	100	K	28	44	Right-handed alpha
Helix 101	101	K	54	69	Right-handed alpha
Helix 102	102	K	76	82	Right-handed 310
Helix 103	103	K	83	92	Right-handed alpha
Helix 104	104	K	104	108	Right-handed 310
Helix 105	105	K	109	114	Right-handed 310
Helix 106	106	K	117	121	Right-handed 310
Helix 107	107	K	130	143	Right-handed alpha
Helix 108	108	L	12	16	Right-handed 310
Helix 109	109	L	20	25	Right-handed alpha
Helix 110	110	L	28	43	Right-handed alpha
Helix 111	111	L	54	68	Right-handed alpha
Helix 112	112	L	76	82	Right-handed 310
Helix 113	113	L	83	92	Right-handed alpha
Helix 114	114	L	104	108	Right-handed 310
Helix 115	115	L	109	114	Right-handed 310
Helix 116	116	L	117	121	Right-handed 310
Helix 117	117	L	130	143	Right-handed alpha
Helix 118	118	M	12	16	Right-handed 310
Helix 119	119	M	20	25	Right-handed alpha
Helix 120	120	M	28	44	Right-handed alpha
Helix 121	121	M	54	69	Right-handed alpha
Helix 122	122	M	76	82	Right-handed 310
Helix 123	123	M	83	93	Right-handed alpha
Helix 124	124	M	109	114	Right-handed 310
Helix 125	125	M	117	121	Right-handed 310
Helix 126	126	M	130	142	Right-handed alpha
Helix 127	127	N	12	16	Right-handed 310
Helix 128	128	N	20	25	Right-handed alpha
Helix 129	129	N	28	44	Right-handed alpha
Helix 130	130	N	54	69	Right-handed alpha
Helix 131	131	N	76	82	Right-handed 310
Helix 132	132	N	83	91	Right-handed alpha
Helix 133	133	N	104	108	Right-handed 310
Helix 134	134	N	109	114	Right-handed 310
Helix 135	135	N	130	142	Right-handed alpha
Helix 136	136	O	12	16	Right-handed 310
Helix 137	137	O	20	25	Right-handed alpha
Helix 138	138	O	28	44	Right-handed alpha
Helix 139	139	O	54	68	Right-handed alpha
Helix 140	140	O	76	82	Right-handed 310
Helix 141	141	O	83	91	Right-handed alpha
Helix 142	142	O	104	108	Right-handed 310
Helix 143	143	O	109	114	Right-handed 310
Helix 144	144	O	117	121	Right-handed 310
Helix 145	145	O	130	143	Right-handed alpha
Helix 146	146	P	12	16	Right-handed 310
Helix 147	147	P	20	25	Right-handed alpha
Helix 148	148	P	28	43	Right-handed alpha
Helix 149	149	P	54	69	Right-handed alpha
Helix 150	150	P	76	82	Right-handed 310
Helix 151	151	P	83	92	Right-handed alpha
Helix 152	152	P	109	114	Right-handed 310
Helix 153	153	P	117	121	Right-handed 310
Helix 154	154	P	130	142	Right-handed alpha
Helix 155	155	Q	12	16	Right-handed 310
Helix 156	156	Q	28	44	Right-handed alpha
Helix 157	157	Q	54	69	Right-handed alpha
Helix 158	158	Q	76	82	Right-handed 310
Helix 159	159	Q	83	92	Right-handed alpha
Helix 160	160	Q	104	108	Right-handed 310
Helix 161	161	Q	109	114	Right-handed 310
Helix 162	162	Q	117	121	Right-handed 310
Helix 163	163	Q	130	143	Right-handed alpha
Helix 164	164	R	12	16	Right-handed 310
Helix 165	165	R	20	25	Right-handed alpha
Helix 166	166	R	28	43	Right-handed alpha
Helix 167	167	R	54	69	Right-handed alpha
Helix 168	168	R	76	82	Right-handed 310
Helix 169	169	R	83	92	Right-handed alpha
Helix 170	170	R	104	108	Right-handed 310
Helix 171	171	R	109	114	Right-handed 310
Helix 172	172	R	117	121	Right-handed 310
Helix 173	173	R	130	143	Right-handed alpha
Helix 174	174	S	12	16	Right-handed 310
Helix 175	175	S	20	25	Right-handed alpha
Helix 176	176	S	28	44	Right-handed alpha
Helix 177	177	S	54	68	Right-handed alpha
Helix 178	178	S	76	82	Right-handed 310
Helix 179	179	S	83	92	Right-handed alpha
Helix 180	180	S	104	108	Right-handed 310
Helix 181	181	S	109	114	Right-handed 310
Helix 182	182	S	117	121	Right-handed 310
Helix 183	183	S	130	143	Right-handed alpha
Helix 184	184	T	12	16	Right-handed 310
Helix 185	185	T	20	25	Right-handed alpha
Helix 186	186	T	28	44	Right-handed alpha
Helix 187	187	T	54	69	Right-handed alpha
Helix 188	188	T	76	82	Right-handed 310
Helix 189	189	T	83	92	Right-handed alpha
Helix 190	190	T	104	108	Right-handed 310
Helix 191	191	T	109	114	Right-handed 310
Helix 192	192	T	117	121	Right-handed 310
Helix 193	193	T	130	143	Right-handed alpha
Helix 194	194	U	12	16	Right-handed 310
Helix 195	195	U	20	25	Right-handed alpha
Helix 196	196	U	28	43	Right-handed alpha
Helix 197	197	U	54	69	Right-handed alpha
Helix 198	198	U	76	82	Right-handed 310
Helix 199	199	U	83	92	Right-handed alpha
Helix 200	200	U	104	108	Right-handed 310
Helix 201	201	U	109	114	Right-handed 310
Helix 202	202	U	117	121	Right-handed 310
Helix 203	203	U	130	142	Right-handed alpha
Helix 204	204	V	12	16	Right-handed 310
Helix 205	205	V	20	25	Right-handed alpha
Helix 206	206	V	28	44	Right-handed alpha
Helix 207	207	V	54	69	Right-handed alpha
Helix 208	208	V	76	82	Right-handed 310
Helix 209	209	V	83	91	Right-handed alpha
Helix 210	210	V	109	114	Right-handed 310
Helix 211	211	V	130	142	Right-handed alpha
Helix 212	212	W	12	16	Right-handed 310
Helix 213	213	W	20	25	Right-handed alpha
Helix 214	214	W	28	44	Right-handed alpha
Helix 215	215	W	54	68	Right-handed alpha
Helix 216	216	W	76	82	Right-handed 310
Helix 217	217	W	83	91	Right-handed alpha
Helix 218	218	W	104	108	Right-handed 310
Helix 219	219	W	109	114	Right-handed 310
Helix 220	220	W	117	121	Right-handed 310
Helix 221	221	W	130	143	Right-handed alpha
Helix 222	222	X	12	16	Right-handed 310
Helix 223	223	X	20	25	Right-handed alpha
Helix 224	224	X	28	43	Right-handed alpha
Helix 225	225	X	54	68	Right-handed alpha
Helix 226	226	X	76	82	Right-handed 310
Helix 227	227	X	83	92	Right-handed alpha
Helix 228	228	X	104	108	Right-handed 310
Helix 229	229	X	109	114	Right-handed 310
Helix 230	230	X	117	121	Right-handed 310
Helix 231	231	X	130	142	Right-handed alpha

There are 12 sheets in PDB entry 3N86. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	51	first strand
Strand 2	A	4	9	parallel
Strand 3	A	72	75	parallel
Strand 4	A	97	101	parallel
Strand 5	A	123	126	parallel
Strand 6	G	123	126	anti-parallel
Strand 7	G	97	101	parallel
Strand 8	G	72	75	parallel
Strand 9	G	4	9	parallel
Strand 10	G	46	51	parallel

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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	51	first strand
Strand 2	B	4	9	parallel
Strand 3	B	72	75	parallel
Strand 4	B	97	101	parallel
Strand 5	B	123	126	parallel
Strand 6	F	123	126	anti-parallel
Strand 7	F	97	101	parallel
Strand 8	F	72	75	parallel
Strand 9	F	4	9	parallel
Strand 10	F	46	51	parallel

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There are 10 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	46	51	first strand
Strand 2	C	4	9	parallel
Strand 3	C	72	75	parallel
Strand 4	C	97	101	parallel
Strand 5	C	123	126	parallel
Strand 6	H	123	126	anti-parallel
Strand 7	H	97	101	parallel
Strand 8	H	72	75	parallel
Strand 9	H	4	9	parallel
Strand 10	H	46	51	parallel

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There are 10 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	46	51	first strand
Strand 2	D	4	9	parallel
Strand 3	D	72	75	parallel
Strand 4	D	97	101	parallel
Strand 5	D	123	126	parallel
Strand 6	I	123	126	anti-parallel
Strand 7	I	97	101	parallel
Strand 8	I	72	75	parallel
Strand 9	I	4	9	parallel
Strand 10	I	46	51	parallel

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There are 10 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	46	51	first strand
Strand 2	E	4	9	parallel
Strand 3	E	72	75	parallel
Strand 4	E	97	101	parallel
Strand 5	E	123	126	parallel
Strand 6	K	123	126	anti-parallel
Strand 7	K	97	101	parallel
Strand 8	K	72	75	parallel
Strand 9	K	4	9	parallel
Strand 10	K	46	51	parallel

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There are 10 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	45	51	first strand
Strand 2	J	3	9	parallel
Strand 3	J	72	75	parallel
Strand 4	J	97	101	parallel
Strand 5	J	123	126	parallel
Strand 6	L	123	126	anti-parallel
Strand 7	L	97	101	parallel
Strand 8	L	72	75	parallel
Strand 9	L	4	9	parallel
Strand 10	L	46	51	parallel

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There are 10 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	46	51	first strand
Strand 2	M	4	9	parallel
Strand 3	M	72	75	parallel
Strand 4	M	97	101	parallel
Strand 5	M	123	126	parallel
Strand 6	S	123	126	anti-parallel
Strand 7	S	97	101	parallel
Strand 8	S	72	75	parallel
Strand 9	S	4	9	parallel
Strand 10	S	46	51	parallel

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There are 10 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	46	51	first strand
Strand 2	N	4	9	parallel
Strand 3	N	72	75	parallel
Strand 4	N	97	101	parallel
Strand 5	N	123	126	parallel
Strand 6	R	123	126	anti-parallel
Strand 7	R	97	101	parallel
Strand 8	R	72	75	parallel
Strand 9	R	4	9	parallel
Strand 10	R	46	51	parallel

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There are 10 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	46	51	first strand
Strand 2	O	4	9	parallel
Strand 3	O	72	75	parallel
Strand 4	O	97	101	parallel
Strand 5	O	123	126	parallel
Strand 6	T	123	126	anti-parallel
Strand 7	T	97	101	parallel
Strand 8	T	72	75	parallel
Strand 9	T	4	9	parallel
Strand 10	T	46	51	parallel

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There are 10 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	46	51	first strand
Strand 2	P	4	9	parallel
Strand 3	P	72	75	parallel
Strand 4	P	97	101	parallel
Strand 5	P	123	126	parallel
Strand 6	U	123	126	anti-parallel
Strand 7	U	97	101	parallel
Strand 8	U	72	75	parallel
Strand 9	U	4	9	parallel
Strand 10	U	46	51	parallel

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There are 10 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	46	51	first strand
Strand 2	Q	4	9	parallel
Strand 3	Q	72	75	parallel
Strand 4	Q	97	101	parallel
Strand 5	Q	123	126	parallel
Strand 6	W	123	126	anti-parallel
Strand 7	W	97	101	parallel
Strand 8	W	72	75	parallel
Strand 9	W	4	9	parallel
Strand 10	W	46	51	parallel

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There are 10 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	46	51	first strand
Strand 2	V	4	9	parallel
Strand 3	V	72	75	parallel
Strand 4	V	97	101	parallel
Strand 5	V	123	126	parallel
Strand 6	X	123	126	anti-parallel
Strand 7	X	97	101	parallel
Strand 8	X	72	75	parallel
Strand 9	X	4	9	parallel
Strand 10	X	46	51	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3N86

Analysis of interatomic Contacts of Structural Units in PDB entry:
3N86