Analysis of interatomic Contacts of Structural Units in PDB entry:
3NBI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3NBI entry

There is 1 chain in PDB entry 3NBI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 2GLU 204
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 3NBI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 19Right-handed alpha
Helix 2
2
A
23 39Right-handed alpha
Helix 3
3
A
44 58Right-handed alpha
Helix 4
4
A
60 65Right-handed alpha
Helix 5
5
A
95 109Right-handed alpha
Helix 6
6
A
183 185Right-handed 310
Helix 7
7
A
194 202Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3NBI.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 191first strand
Strand 2
A
166 176anti-parallel
Strand 3
A
179 182anti-parallel
Strand 4
A
145 150parallel
Strand 5
A
135 140anti-parallel
Strand 6
A
78 94anti-parallel
Strand 7
A
166 176anti-parallel
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