Analysis of interatomic Contacts of Structural Units in PDB entry:
3ND0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ND0 entry

There are 2 chains in PDB entry 3ND0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 26ARG 450
B
 SER 26ARG 450
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 40 helices in PDB entry 3ND0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
28 67Right-handed alpha
Helix 2
2
A
72 94Right-handed alpha
Helix 3
3
A
97 101Right-handed 310
Helix 4
4
A
104 112Right-handed alpha
Helix 5
5
A
119 137Right-handed alpha
Helix 6
6
A
143 162Right-handed alpha
Helix 7
7
A
165 186Right-handed alpha
Helix 8
8
A
187 197Right-handed alpha
Helix 9
9
A
209 228Right-handed alpha
Helix 10
10
A
243 245Right-handed 310
Helix 11
11
A
246 277Right-handed alpha
Helix 12
12
A
279 298Right-handed alpha
Helix 13
13
A
308 316Right-handed alpha
Helix 14
14
A
321 342Right-handed alpha
Helix 15
15
A
348 371Right-handed alpha
Helix 16
16
A
378 385Right-handed alpha
Helix 17
17
A
387 395Right-handed alpha
Helix 18
18
A
396 407Right-handed alpha
Helix 19
19
A
413 429Right-handed alpha
Helix 20
20
A
435 446Right-handed alpha
Helix 21
21
B
28 67Right-handed alpha
Helix 22
22
B
72 94Right-handed alpha
Helix 23
23
B
97 101Right-handed 310
Helix 24
24
B
104 112Right-handed alpha
Helix 25
25
B
119 137Right-handed alpha
Helix 26
26
B
143 162Right-handed alpha
Helix 27
27
B
165 186Right-handed alpha
Helix 28
28
B
187 197Right-handed alpha
Helix 29
29
B
208 228Right-handed alpha
Helix 30
30
B
243 245Right-handed 310
Helix 31
31
B
246 277Right-handed alpha
Helix 32
32
B
279 298Right-handed alpha
Helix 33
33
B
308 316Right-handed alpha
Helix 34
34
B
321 342Right-handed alpha
Helix 35
35
B
348 371Right-handed alpha
Helix 36
36
B
378 385Right-handed alpha
Helix 37
37
B
387 395Right-handed alpha
Helix 38
38
B
396 407Right-handed alpha
Helix 39
39
B
413 429Right-handed alpha
Helix 40
40
B
435 447Right-handed alpha
Back to top of page
There are no sheets in PDB entry 3ND0
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il