Analysis of interatomic Contacts of Structural Units in PDB entry:
3NHV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3NHV entry

There are 5 chains in PDB entry 3NHV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 17GLU 150
B
 ASN 17GLU 153
C
 ALA 16GLU 150
D
 ALA 16LYS 149
E
 ASN 17LYS 149
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 3NHV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 31Right-handed alpha
Helix 2
2
A
35 44Right-handed alpha
Helix 3
3
A
56 63Right-handed alpha
Helix 4
4
A
72 76Right-handed 310
Helix 5
5
A
100 112Right-handed alpha
Helix 6
6
A
121 129Right-handed alpha
Helix 7
7
A
137 141Right-handed 310
Helix 8
8
B
17 30Right-handed alpha
Helix 9
9
B
35 44Right-handed alpha
Helix 10
10
B
56 63Right-handed alpha
Helix 11
11
B
72 76Right-handed 310
Helix 12
12
B
100 112Right-handed alpha
Helix 13
13
B
121 129Right-handed alpha
Helix 14
14
B
137 141Right-handed 310
Helix 15
15
C
17 31Right-handed alpha
Helix 16
16
C
34 44Right-handed alpha
Helix 17
17
C
56 63Right-handed alpha
Helix 18
18
C
72 76Right-handed 310
Helix 19
19
C
100 112Right-handed alpha
Helix 20
20
C
121 129Right-handed alpha
Helix 21
21
C
137 141Right-handed 310
Helix 22
22
D
17 30Right-handed alpha
Helix 23
23
D
34 44Right-handed alpha
Helix 24
24
D
56 63Right-handed alpha
Helix 25
25
D
72 76Right-handed 310
Helix 26
26
D
100 112Right-handed alpha
Helix 27
27
D
121 129Right-handed alpha
Helix 28
28
D
137 141Right-handed 310
Helix 29
29
E
17 31Right-handed alpha
Helix 30
30
E
34 45Right-handed alpha
Helix 31
31
E
56 63Right-handed alpha
Helix 32
32
E
72 76Right-handed 310
Helix 33
33
E
100 112Right-handed alpha
Helix 34
34
E
121 129Right-handed alpha
Helix 35
35
E
137 141Right-handed 310
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There are 5 sheets in PDB entry 3NHV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 34first strand
Strand 2
A
115 120parallel
Strand 3
A
89 93parallel
Strand 4
A
49 53parallel
Strand 5
A
69 70parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 34first strand
Strand 2
B
115 120parallel
Strand 3
B
89 93parallel
Strand 4
B
49 53parallel
Strand 5
B
69 70parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
32 33first strand
Strand 2
C
115 119parallel
Strand 3
C
89 93parallel
Strand 4
C
49 53parallel
Strand 5
C
69 70parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
32 33first strand
Strand 2
D
115 119parallel
Strand 3
D
89 93parallel
Strand 4
D
49 53parallel
Strand 5
D
69 70parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
32 33first strand
Strand 2
E
115 119parallel
Strand 3
E
89 93parallel
Strand 4
E
49 53parallel
Strand 5
E
69 70parallel
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