Analysis of interatomic Contacts of Structural Units in PDB entry:
3NMU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3NMU entry

There are 10 chains in PDB entry 3NMU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 8TYR 373
B
 PHE 8TYR 373
C
 LYS 4LYS 124
D
 G 1 C 34
E
 G 1 C 34
F
 MET 1PRO 227
G
 LYS 4LYS 124
J
 MET 1PRO 227
I
 G 1 C 13
K
 A 2 C 13
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 73 helices in PDB entry 3NMU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 45Right-handed alpha
Helix 2
2
A
48 60Right-handed alpha
Helix 3
3
A
70 79Right-handed alpha
Helix 4
4
A
92 97Right-handed alpha
Helix 5
5
A
99 105Right-handed alpha
Helix 6
6
A
107 124Right-handed alpha
Helix 7
7
A
130 161Right-handed alpha
Helix 8
8
A
166 171Right-handed alpha
Helix 9
9
A
173 185Right-handed alpha
Helix 10
10
A
186 190Right-handed 310
Helix 11
11
A
191 198Right-handed alpha
Helix 12
12
A
202 213Right-handed alpha
Helix 13
13
A
221 254Right-handed alpha
Helix 14
14
A
257 265Right-handed alpha
Helix 15
15
A
265 277Right-handed alpha
Helix 16
16
A
278 284Right-handed alpha
Helix 17
17
A
286 293Right-handed alpha
Helix 18
18
A
295 304Right-handed alpha
Helix 19
19
A
313 317Right-handed 310
Helix 20
20
A
318 323Right-handed alpha
Helix 21
21
A
328 350Right-handed alpha
Helix 22
22
A
354 372Right-handed alpha
Helix 23
23
B
34 43Right-handed alpha
Helix 24
24
B
48 61Right-handed alpha
Helix 25
25
B
70 80Right-handed alpha
Helix 26
26
B
90 99Right-handed alpha
Helix 27
27
B
99 105Right-handed alpha
Helix 28
28
B
108 124Right-handed alpha
Helix 29
29
B
130 161Right-handed alpha
Helix 30
30
B
166 171Right-handed alpha
Helix 31
31
B
173 184Right-handed alpha
Helix 32
32
B
186 190Right-handed 310
Helix 33
33
B
192 197Right-handed alpha
Helix 34
34
B
202 213Right-handed alpha
Helix 35
35
B
221 255Right-handed alpha
Helix 36
36
B
257 265Right-handed alpha
Helix 37
37
B
265 277Right-handed alpha
Helix 38
38
B
278 284Right-handed alpha
Helix 39
39
B
286 292Right-handed alpha
Helix 40
40
B
295 305Right-handed alpha
Helix 41
41
B
313 317Right-handed 310
Helix 42
42
B
318 323Right-handed alpha
Helix 43
43
B
325 328Right-handed 310
Helix 44
44
B
329 350Right-handed alpha
Helix 45
45
B
354 370Right-handed alpha
Helix 46
46
C
15 29Right-handed alpha
Helix 47
47
C
36 46Right-handed alpha
Helix 48
48
C
61 66Right-handed alpha
Helix 49
49
C
68 73Right-handed alpha
Helix 50
50
C
83 91Right-handed alpha
Helix 51
51
C
107 122Right-handed alpha
Helix 52
52
F
57 64Right-handed alpha
Helix 53
53
F
85 96Right-handed alpha
Helix 54
54
F
107 115Right-handed alpha
Helix 55
55
F
116 118Right-handed 310
Helix 56
56
F
133 138Right-handed 310
Helix 57
57
F
155 167Right-handed alpha
Helix 58
58
F
180 184Right-handed alpha
Helix 59
59
F
188 202Right-handed alpha
Helix 60
60
G
13 26Right-handed alpha
Helix 61
61
G
36 46Right-handed alpha
Helix 62
62
G
66 74Right-handed alpha
Helix 63
63
G
83 92Right-handed alpha
Helix 64
64
G
105 107Right-handed 310
Helix 65
65
G
108 123Right-handed alpha
Helix 66
66
J
57 64Right-handed alpha
Helix 67
67
J
85 96Right-handed alpha
Helix 68
68
J
107 112Right-handed alpha
Helix 69
69
J
113 115Right-handed 310
Helix 70
70
J
133 138Right-handed 310
Helix 71
71
J
155 167Right-handed alpha
Helix 72
72
J
180 184Right-handed alpha
Helix 73
73
J
188 202Right-handed alpha
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There are 11 sheets in PDB entry 3NMU. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 10first strand
Strand 2
A
15 19anti-parallel
Strand 3
A
25 30anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 68first strand
Strand 2
A
83 86parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 11first strand
Strand 2
B
15 18anti-parallel
Strand 3
B
27 30anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 68first strand
Strand 2
B
84 86parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
31 35first strand
Strand 2
C
99 105anti-parallel
Strand 3
C
51 55anti-parallel
Strand 4
C
78 81parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
3 6first strand
Strand 2
F
12 16anti-parallel
Strand 3
F
22 27anti-parallel
Strand 4
F
47 50anti-parallel
Strand 5
F
40 42anti-parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
124 128first strand
Strand 2
F
100 105parallel
Strand 3
F
76 80parallel
Strand 4
F
144 149parallel
Strand 5
F
168 179parallel
Strand 6
F
219 225anti-parallel
Strand 7
F
205 211anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
32 35first strand
Strand 2
G
99 104anti-parallel
Strand 3
G
51 55anti-parallel
Strand 4
G
78 81parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
3 6first strand
Strand 2
J
12 16anti-parallel
Strand 3
J
22 27anti-parallel
Strand 4
J
46 51anti-parallel
Strand 5
J
40 43anti-parallel
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There are 7 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
124 125first strand
Strand 2
J
100 104parallel
Strand 3
J
76 80parallel
Strand 4
J
144 150parallel
Strand 5
J
168 179parallel
Strand 6
J
222 225anti-parallel
Strand 7
J
205 209anti-parallel
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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
124 125first strand
Strand 2
J
100 104parallel
Strand 3
J
76 80parallel
Strand 4
J
144 150parallel
Strand 5
J
168 179parallel
Strand 6
J
219 220anti-parallel
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