Analysis of interatomic Contacts of Structural Units in PDB entry:
3NMZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3NMZ entry

There are 4 chains in PDB entry 3NMZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 326LYS 736
B
 ASP 326ARG 733
D
 SER 172ASP 255
C
 SER 171ASP 255
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 3NMZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
327 339Right-handed alpha
Helix 2
2
A
342 351Right-handed alpha
Helix 3
3
A
352 361Right-handed alpha
Helix 4
4
A
376 394Right-handed alpha
Helix 5
5
A
397 425Right-handed alpha
Helix 6
6
A
446 457Right-handed alpha
Helix 7
7
A
459 469Right-handed alpha
Helix 8
8
A
470 486Right-handed alpha
Helix 9
9
A
491 510Right-handed alpha
Helix 10
10
A
512 522Right-handed alpha
Helix 11
11
A
522 532Right-handed alpha
Helix 12
12
A
533 535Right-handed 310
Helix 13
13
A
537 552Right-handed alpha
Helix 14
14
A
556 566Right-handed alpha
Helix 15
15
A
567 577Right-handed alpha
Helix 16
16
A
581 598Right-handed alpha
Helix 17
17
A
599 609Right-handed alpha
Helix 18
18
A
611 620Right-handed alpha
Helix 19
19
A
629 647Right-handed alpha
Helix 20
20
A
649 659Right-handed alpha
Helix 21
21
A
660 669Right-handed alpha
Helix 22
22
A
673 689Right-handed alpha
Helix 23
23
A
691 702Right-handed alpha
Helix 24
24
A
702 709Right-handed alpha
Helix 25
25
A
715 731Right-handed alpha
Helix 26
26
B
327 340Right-handed alpha
Helix 27
27
B
344 351Right-handed alpha
Helix 28
28
B
351 361Right-handed alpha
Helix 29
29
B
376 392Right-handed alpha
Helix 30
30
B
397 427Right-handed alpha
Helix 31
31
B
442 445Right-handed 310
Helix 32
32
B
446 457Right-handed alpha
Helix 33
33
B
459 469Right-handed alpha
Helix 34
34
B
470 486Right-handed alpha
Helix 35
35
B
491 510Right-handed alpha
Helix 36
36
B
512 522Right-handed alpha
Helix 37
37
B
522 532Right-handed alpha
Helix 38
38
B
533 535Right-handed 310
Helix 39
39
B
537 552Right-handed alpha
Helix 40
40
B
556 566Right-handed alpha
Helix 41
41
B
567 577Right-handed alpha
Helix 42
42
B
581 596Right-handed alpha
Helix 43
43
B
599 609Right-handed alpha
Helix 44
44
B
611 620Right-handed alpha
Helix 45
45
B
629 647Right-handed alpha
Helix 46
46
B
649 659Right-handed alpha
Helix 47
47
B
660 670Right-handed alpha
Helix 48
48
B
673 688Right-handed alpha
Helix 49
49
B
691 700Right-handed alpha
Helix 50
50
B
703 708Right-handed alpha
Helix 51
51
B
715 731Right-handed alpha
Helix 52
52
D
186 193Right-handed alpha
Helix 53
53
C
187 192Right-handed alpha
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There are 2 sheets in PDB entry 3NMZ. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
240 244first strand
Strand 2
D
231 235anti-parallel
Strand 3
D
220 225anti-parallel
Strand 4
D
198 201anti-parallel
Strand 5
D
248 250anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
240 244first strand
Strand 2
C
231 235anti-parallel
Strand 3
C
220 225anti-parallel
Strand 4
C
198 201anti-parallel
Strand 5
C
248 251anti-parallel
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