Analysis of interatomic Contacts of Structural Units in PDB entry:
3NOG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3NOG entry

There are 2 chains in PDB entry 3NOG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 2	PHE 1033
B	PRO 2	GLU 346

There are147 helices in PDB entry 3NOG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	1	6	Right-handed alpha
Helix 2	2	A	8	30	Right-handed alpha
Helix 3	3	A	53	61	Right-handed alpha
Helix 4	4	A	61	69	Right-handed alpha
Helix 5	5	A	99	115	Right-handed alpha
Helix 6	6	A	116	118	Right-handed 310
Helix 7	7	A	119	124	Right-handed alpha
Helix 8	8	A	150	162	Right-handed alpha
Helix 9	9	A	162	168	Right-handed alpha
Helix 10	10	A	189	196	Right-handed alpha
Helix 11	11	A	199	211	Right-handed alpha
Helix 12	12	A	242	248	Right-handed alpha
Helix 13	13	A	298	312	Right-handed alpha
Helix 14	14	A	330	359	Right-handed alpha
Helix 15	15	A	366	387	Right-handed alpha
Helix 16	16	A	392	401	Right-handed alpha
Helix 17	17	A	402	420	Right-handed alpha
Helix 18	18	A	426	436	Right-handed alpha
Helix 19	19	A	438	451	Right-handed alpha
Helix 20	20	A	454	458	Right-handed 310
Helix 21	21	A	460	486	Right-handed alpha
Helix 22	22	A	487	496	Right-handed alpha
Helix 23	23	A	513	537	Right-handed alpha
Helix 24	24	A	539	559	Right-handed alpha
Helix 25	25	A	583	600	Right-handed alpha
Helix 26	26	A	643	654	Right-handed alpha
Helix 27	27	A	691	705	Right-handed alpha
Helix 28	28	A	732	738	Right-handed alpha
Helix 29	29	A	742	752	Right-handed alpha
Helix 30	30	A	777	781	Right-handed 310
Helix 31	31	A	782	788	Right-handed 310
Helix 32	32	A	802	804	Right-handed 310
Helix 33	33	A	837	846	Right-handed alpha
Helix 34	34	A	874	892	Right-handed alpha
Helix 35	35	A	898	902	Right-handed 310
Helix 36	36	A	905	910	Right-handed alpha
Helix 37	37	A	910	918	Right-handed alpha
Helix 38	38	A	924	956	Right-handed alpha
Helix 39	39	A	959	965	Right-handed alpha
Helix 40	40	A	967	984	Right-handed alpha
Helix 41	41	A	986	991	Right-handed alpha
Helix 42	42	A	996	1012	Right-handed alpha
Helix 43	43	A	1012	1017	Right-handed alpha
Helix 44	44	A	1017	1032	Right-handed alpha
Helix 45	45	B	3	8	Right-handed alpha
Helix 46	46	B	8	26	Right-handed alpha
Helix 47	47	B	53	60	Right-handed alpha
Helix 48	48	B	60	69	Right-handed alpha
Helix 49	49	B	99	114	Right-handed alpha
Helix 50	50	B	115	118	Right-handed 310
Helix 51	51	B	119	126	Right-handed alpha
Helix 52	52	B	150	169	Right-handed alpha
Helix 53	53	B	189	196	Right-handed alpha
Helix 54	54	B	199	210	Right-handed alpha
Helix 55	55	B	242	248	Right-handed alpha
Helix 56	56	B	298	312	Right-handed alpha
Helix 57	57	B	313	317	Right-handed 310
Helix 58	58	B	329	357	Right-handed alpha
Helix 59	59	B	361	387	Right-handed alpha
Helix 60	60	B	391	400	Right-handed alpha
Helix 61	61	B	401	422	Right-handed alpha
Helix 62	62	B	426	437	Right-handed alpha
Helix 63	63	B	438	454	Right-handed alpha
Helix 64	64	B	455	458	Right-handed 310
Helix 65	65	B	460	486	Right-handed alpha
Helix 66	66	B	488	497	Right-handed alpha
Helix 67	67	B	514	535	Right-handed alpha
Helix 68	68	B	537	557	Right-handed alpha
Helix 69	69	B	585	599	Right-handed alpha
Helix 70	70	B	639	642	Right-handed 310
Helix 71	71	B	643	653	Right-handed alpha
Helix 72	72	B	669	673	Right-handed 310
Helix 73	73	B	691	706	Right-handed alpha
Helix 74	74	B	732	739	Right-handed alpha
Helix 75	75	B	742	746	Right-handed 310
Helix 76	76	B	777	780	Right-handed 310
Helix 77	77	B	782	788	Right-handed 310
Helix 78	78	B	836	850	Right-handed alpha
Helix 79	79	B	864	870	Right-handed alpha
Helix 80	80	B	875	892	Right-handed alpha
Helix 81	81	B	897	903	Right-handed alpha
Helix 82	82	B	904	920	Right-handed alpha
Helix 83	83	B	924	955	Right-handed alpha
Helix 84	84	B	959	971	Right-handed alpha
Helix 85	85	B	971	992	Right-handed alpha
Helix 86	86	B	997	1003	Right-handed alpha
Helix 87	87	B	1004	1017	Right-handed alpha
Helix 88	88	B	1017	1033	Right-handed alpha
Helix 89	89	C	1	7	Right-handed alpha
Helix 90	90	C	8	25	Right-handed alpha
Helix 91	91	C	53	61	Right-handed alpha
Helix 92	92	C	61	67	Right-handed alpha
Helix 93	93	C	99	113	Right-handed alpha
Helix 94	94	C	119	124	Right-handed alpha
Helix 95	95	C	150	162	Right-handed alpha
Helix 96	96	C	162	168	Right-handed alpha
Helix 97	97	C	199	211	Right-handed alpha
Helix 98	98	C	242	248	Right-handed alpha
Helix 99	99	C	298	314	Right-handed alpha
Helix 100	100	C	315	317	Right-handed 310
Helix 101	101	C	329	360	Right-handed alpha
Helix 102	102	C	361	367	Right-handed alpha
Helix 103	103	C	370	386	Right-handed alpha
Helix 104	104	C	391	402	Right-handed alpha
Helix 105	105	C	406	424	Right-handed alpha
Helix 106	106	C	426	452	Right-handed alpha
Helix 107	107	C	453	458	Right-handed alpha
Helix 108	108	C	460	487	Right-handed alpha
Helix 109	109	C	487	496	Right-handed alpha
Helix 110	110	C	512	535	Right-handed alpha
Helix 111	111	C	537	558	Right-handed alpha
Helix 112	112	C	583	600	Right-handed alpha
Helix 113	113	C	643	657	Right-handed alpha
Helix 114	114	C	691	709	Right-handed alpha
Helix 115	115	C	732	739	Right-handed alpha
Helix 116	116	C	742	755	Right-handed alpha
Helix 117	117	C	776	780	Right-handed 310
Helix 118	118	C	782	788	Right-handed 310
Helix 119	119	C	836	850	Right-handed alpha
Helix 120	120	C	860	892	Right-handed alpha
Helix 121	121	C	896	901	Right-handed alpha
Helix 122	122	C	904	918	Right-handed alpha
Helix 123	123	C	924	956	Right-handed alpha
Helix 124	124	C	959	971	Right-handed alpha
Helix 125	125	C	971	985	Right-handed alpha
Helix 126	126	C	987	992	Right-handed alpha
Helix 127	127	C	1005	1017	Right-handed alpha
Helix 128	128	C	1017	1030	Right-handed alpha
Helix 129	129	D	13	25	Right-handed alpha
Helix 130	130	D	27	37	Right-handed alpha
Helix 131	131	D	49	56	Right-handed alpha
Helix 132	132	D	59	71	Right-handed alpha
Helix 133	133	D	82	91	Right-handed alpha
Helix 134	134	D	92	102	Right-handed alpha
Helix 135	135	D	115	123	Right-handed alpha
Helix 136	136	D	125	136	Right-handed alpha
Helix 137	137	D	148	157	Right-handed alpha
Helix 138	138	D	159	164	Right-handed alpha
Helix 139	139	E	14	25	Right-handed alpha
Helix 140	140	E	26	33	Right-handed alpha
Helix 141	141	E	52	56	Right-handed 310
Helix 142	142	E	60	68	Right-handed alpha
Helix 143	143	E	82	91	Right-handed alpha
Helix 144	144	E	92	103	Right-handed alpha
Helix 145	145	E	128	136	Right-handed alpha
Helix 146	146	E	151	157	Right-handed alpha
Helix 147	147	E	160	165	Right-handed alpha

There are 30 sheets in PDB entry 3NOG. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	32	33	first strand
Strand 2	A	390	391	parallel

Back to list of sheets
Back to top of page

There are 6 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	128	130	first strand
Strand 2	A	42	48	anti-parallel
Strand 3	A	87	94	anti-parallel
Strand 4	A	75	82	anti-parallel
Strand 5	A	816	819	anti-parallel
Strand 6	A	822	823	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	172	177	first strand
Strand 2	A	284	293	anti-parallel
Strand 3	A	138	144	anti-parallel
Strand 4	A	321	328	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	172	177	first strand
Strand 2	A	284	293	anti-parallel
Strand 3	A	278	281	anti-parallel
Strand 4	A	606	613	anti-parallel
Strand 5	A	624	631	anti-parallel
Strand 6	A	571	577	anti-parallel
Strand 7	A	662	667	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	266	272	first strand
Strand 2	A	182	188	anti-parallel
Strand 3	A	774	775	parallel

Back to list of sheets
Back to top of page

There are 3 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	233	235	first strand
Strand 2	B	724	731	parallel
Strand 3	B	805	812	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	250	253	first strand
Strand 2	A	259	261	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	717	718	first strand
Strand 2	A	827	829	anti-parallel
Strand 3	A	680	686	anti-parallel
Strand 4	A	855	858	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	724	729	first strand
Strand 2	A	807	812	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	760	764	first strand
Strand 2	A	767	771	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	790	791	first strand
Strand 2	A	799	800	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	128	131	first strand
Strand 2	B	42	48	anti-parallel
Strand 3	B	87	94	anti-parallel
Strand 4	B	75	82	anti-parallel
Strand 5	B	816	819	anti-parallel
Strand 6	B	822	831	anti-parallel
Strand 7	B	713	718	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	128	131	first strand
Strand 2	B	42	48	anti-parallel
Strand 3	B	87	94	anti-parallel
Strand 4	B	75	82	anti-parallel
Strand 5	B	816	819	anti-parallel
Strand 6	B	822	831	anti-parallel
Strand 7	B	679	685	anti-parallel
Strand 8	B	859	862	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	172	177	first strand
Strand 2	B	289	293	anti-parallel
Strand 3	B	136	144	anti-parallel
Strand 4	B	321	328	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	266	272	first strand
Strand 2	B	182	188	anti-parallel
Strand 3	B	767	775	parallel
Strand 4	B	757	764	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	218	219	first strand
Strand 2	B	232	235	anti-parallel
Strand 3	C	724	728	parallel
Strand 4	C	809	812	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	250	253	first strand
Strand 2	B	259	261	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	280	281	first strand
Strand 2	B	284	285	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	606	613	first strand
Strand 2	B	625	631	anti-parallel
Strand 3	B	571	574	anti-parallel
Strand 4	B	665	667	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	790	792	first strand
Strand 2	B	798	800	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	75	82	first strand
Strand 2	C	87	94	anti-parallel
Strand 3	C	42	48	anti-parallel
Strand 4	C	128	131	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	172	177	first strand
Strand 2	C	284	293	anti-parallel
Strand 3	C	136	143	anti-parallel
Strand 4	C	322	324	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	172	177	first strand
Strand 2	C	284	293	anti-parallel
Strand 3	C	278	281	anti-parallel
Strand 4	C	606	616	anti-parallel
Strand 5	C	619	631	anti-parallel
Strand 6	C	571	577	anti-parallel
Strand 7	C	662	666	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	266	272	first strand
Strand 2	C	182	188	anti-parallel
Strand 3	C	771	772	parallel

Back to list of sheets
Back to top of page

There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	250	253	first strand
Strand 2	C	259	261	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	826	827	first strand
Strand 2	C	682	685	anti-parallel
Strand 3	C	856	858	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	713	714	first strand
Strand 2	C	830	831	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	762	763	first strand
Strand 2	C	768	769	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	790	792	first strand
Strand 2	C	798	800	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	818	819	first strand
Strand 2	C	822	823	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3NOG

Analysis of interatomic Contacts of Structural Units in PDB entry:
3NOG