Analysis of interatomic Contacts of Structural Units in PDB entry:
3NOY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3NOY entry

There are 4 chains in PDB entry 3NOY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASN 349
B
 MET 1GLU 351
C
 MET 1GLU 351
D
 ILE 2GLU 248
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 3NOY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
35 49Right-handed alpha
Helix 2
2
A
60 74Right-handed alpha
Helix 3
3
A
85 95Right-handed alpha
Helix 4
4
A
103 108Right-handed alpha
Helix 5
5
A
109 124Right-handed alpha
Helix 6
6
A
134 136Right-handed 310
Helix 7
7
A
137 145Right-handed alpha
Helix 8
8
A
148 166Right-handed alpha
Helix 9
9
A
179 194Right-handed alpha
Helix 10
10
A
207 225Right-handed alpha
Helix 11
11
A
238 253Right-handed alpha
Helix 12
12
A
274 286Right-handed alpha
Helix 13
13
A
301 308Right-handed alpha
Helix 14
14
A
337 349Right-handed alpha
Helix 15
15
B
35 49Right-handed alpha
Helix 16
16
B
60 74Right-handed alpha
Helix 17
17
B
86 95Right-handed alpha
Helix 18
18
B
109 124Right-handed alpha
Helix 19
19
B
132 136Right-handed 310
Helix 20
20
B
137 145Right-handed alpha
Helix 21
21
B
148 166Right-handed alpha
Helix 22
22
B
179 194Right-handed alpha
Helix 23
23
B
208 225Right-handed alpha
Helix 24
24
B
238 253Right-handed alpha
Helix 25
25
B
274 287Right-handed alpha
Helix 26
26
B
301 308Right-handed alpha
Helix 27
27
B
337 351Right-handed alpha
Helix 28
28
C
35 50Right-handed alpha
Helix 29
29
C
60 74Right-handed alpha
Helix 30
30
C
85 95Right-handed alpha
Helix 31
31
C
109 124Right-handed alpha
Helix 32
32
C
132 136Right-handed 310
Helix 33
33
C
137 145Right-handed alpha
Helix 34
34
C
148 166Right-handed alpha
Helix 35
35
C
179 192Right-handed alpha
Helix 36
36
C
207 225Right-handed alpha
Helix 37
37
C
238 252Right-handed alpha
Helix 38
38
C
274 286Right-handed alpha
Helix 39
39
C
303 308Right-handed alpha
Helix 40
40
C
338 350Right-handed alpha
Helix 41
41
D
35 50Right-handed alpha
Helix 42
42
D
60 65Right-handed alpha
Helix 43
43
D
66 74Right-handed alpha
Helix 44
44
D
86 95Right-handed alpha
Helix 45
45
D
103 107Right-handed 310
Helix 46
46
D
109 124Right-handed alpha
Helix 47
47
D
137 145Right-handed alpha
Helix 48
48
D
148 166Right-handed alpha
Helix 49
49
D
179 194Right-handed alpha
Helix 50
50
D
207 225Right-handed alpha
Helix 51
51
D
238 253Right-handed alpha
Helix 52
52
D
274 286Right-handed alpha
Helix 53
53
D
301 308Right-handed alpha
Helix 54
54
D
337 350Right-handed alpha
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There are 12 sheets in PDB entry 3NOY. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 12first strand
Strand 2
A
15 17anti-parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 28first strand
Strand 2
A
53 57parallel
Strand 3
A
78 81parallel
Strand 4
A
99 102parallel
Strand 5
A
126 132parallel
Strand 6
A
171 176parallel
Strand 7
A
198 200parallel
Strand 8
A
230 231parallel
Strand 9
A
24 28parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 264first strand
Strand 2
A
294 298parallel
Strand 3
A
313 317parallel
Strand 4
A
321 326anti-parallel
Strand 5
A
329 335anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 12first strand
Strand 2
B
15 17anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
171 175first strand
Strand 2
B
126 131parallel
Strand 3
B
99 102parallel
Strand 4
B
78 82parallel
Strand 5
B
53 58parallel
Strand 6
B
24 28parallel
Strand 7
B
230 231parallel
Strand 8
B
199 200parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
261 264first strand
Strand 2
B
294 298parallel
Strand 3
B
313 317parallel
Strand 4
B
321 326anti-parallel
Strand 5
B
329 335anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
10 12first strand
Strand 2
C
15 17anti-parallel
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There are 9 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
24 28first strand
Strand 2
C
53 57parallel
Strand 3
C
78 81parallel
Strand 4
C
99 102parallel
Strand 5
C
126 131parallel
Strand 6
C
171 175parallel
Strand 7
C
198 200parallel
Strand 8
C
230 231parallel
Strand 9
C
24 28parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
261 264first strand
Strand 2
C
294 298parallel
Strand 3
C
313 317parallel
Strand 4
C
321 326anti-parallel
Strand 5
C
329 335anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 12first strand
Strand 2
D
15 17anti-parallel
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There are 8 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
171 175first strand
Strand 2
D
126 131parallel
Strand 3
D
99 102parallel
Strand 4
D
78 81parallel
Strand 5
D
53 57parallel
Strand 6
D
24 28parallel
Strand 7
D
230 231parallel
Strand 8
D
199 200parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
261 264first strand
Strand 2
D
294 298parallel
Strand 3
D
313 317parallel
Strand 4
D
321 326anti-parallel
Strand 5
D
329 335anti-parallel
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