Analysis of interatomic Contacts of Structural Units in PDB entry:
3NPI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3NPI entry

There are 2 chains in PDB entry 3NPI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 15PRO 227
B
 VAL 17ARG 226
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 3NPI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 38Right-handed alpha
Helix 2
2
A
39 48Right-handed alpha
Helix 3
3
A
50 59Right-handed alpha
Helix 4
4
A
60 76Right-handed alpha
Helix 5
5
A
79 84Right-handed alpha
Helix 6
6
A
89 108Right-handed alpha
Helix 7
7
A
108 121Right-handed alpha
Helix 8
8
A
135 152Right-handed alpha
Helix 9
9
A
160 178Right-handed alpha
Helix 10
10
A
178 187Right-handed alpha
Helix 11
11
A
192 212Right-handed alpha
Helix 12
12
B
18 38Right-handed alpha
Helix 13
13
B
39 48Right-handed alpha
Helix 14
14
B
50 59Right-handed alpha
Helix 15
15
B
60 77Right-handed alpha
Helix 16
16
B
89 108Right-handed alpha
Helix 17
17
B
108 121Right-handed alpha
Helix 18
18
B
135 152Right-handed alpha
Helix 19
19
B
160 178Right-handed alpha
Helix 20
20
B
178 187Right-handed alpha
Helix 21
21
B
192 212Right-handed alpha
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There are no sheets in PDB entry 3NPI
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il