Analysis of interatomic Contacts of Structural Units in PDB entry:
3NWY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3NWY entry

There are 6 chains in PDB entry 3NWY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 27THR 261
B
 GLN 26THR 261
C
 SER 28THR 261
D
 SER 28THR 261
E
 SER 28THR 261
F
 GLY 29THR 261
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 3NWY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
38 44Right-handed 310
Helix 2
2
A
50 67Right-handed alpha
Helix 3
3
A
92 118Right-handed alpha
Helix 4
4
A
130 134Right-handed 310
Helix 5
5
A
138 148Right-handed alpha
Helix 6
6
A
164 176Right-handed alpha
Helix 7
7
A
208 214Right-handed alpha
Helix 8
8
A
221 230Right-handed alpha
Helix 9
9
A
244 252Right-handed alpha
Helix 10
10
B
50 67Right-handed alpha
Helix 11
11
B
84 90Right-handed alpha
Helix 12
12
B
92 118Right-handed alpha
Helix 13
13
B
138 148Right-handed alpha
Helix 14
14
B
164 177Right-handed alpha
Helix 15
15
B
209 215Right-handed alpha
Helix 16
16
B
221 231Right-handed alpha
Helix 17
17
B
244 251Right-handed alpha
Helix 18
18
C
38 44Right-handed alpha
Helix 19
19
C
50 67Right-handed alpha
Helix 20
20
C
77 81Right-handed 310
Helix 21
21
C
92 117Right-handed alpha
Helix 22
22
C
138 147Right-handed alpha
Helix 23
23
C
164 176Right-handed alpha
Helix 24
24
C
209 214Right-handed alpha
Helix 25
25
C
221 232Right-handed alpha
Helix 26
26
C
244 251Right-handed alpha
Helix 27
27
D
38 44Right-handed alpha
Helix 28
28
D
50 67Right-handed alpha
Helix 29
29
D
86 90Right-handed 310
Helix 30
30
D
92 118Right-handed alpha
Helix 31
31
D
138 148Right-handed alpha
Helix 32
32
D
164 176Right-handed alpha
Helix 33
33
D
208 214Right-handed alpha
Helix 34
34
D
221 231Right-handed alpha
Helix 35
35
D
244 252Right-handed alpha
Helix 36
36
E
38 42Right-handed 310
Helix 37
37
E
50 67Right-handed alpha
Helix 38
38
E
77 81Right-handed 310
Helix 39
39
E
84 89Right-handed alpha
Helix 40
40
E
92 117Right-handed alpha
Helix 41
41
E
130 134Right-handed 310
Helix 42
42
E
138 148Right-handed alpha
Helix 43
43
E
164 176Right-handed alpha
Helix 44
44
E
208 216Right-handed alpha
Helix 45
45
E
221 230Right-handed alpha
Helix 46
46
E
244 250Right-handed alpha
Helix 47
47
F
39 44Right-handed 310
Helix 48
48
F
50 67Right-handed alpha
Helix 49
49
F
77 81Right-handed 310
Helix 50
50
F
84 90Right-handed alpha
Helix 51
51
F
92 118Right-handed alpha
Helix 52
52
F
138 148Right-handed alpha
Helix 53
53
F
164 176Right-handed alpha
Helix 54
54
F
208 215Right-handed alpha
Helix 55
55
F
221 231Right-handed alpha
Helix 56
56
F
244 251Right-handed alpha
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There are 8 sheets in PDB entry 3NWY. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 136first strand
Strand 2
A
122 126parallel
Strand 3
A
151 155parallel
Strand 4
A
70 75parallel
Strand 5
A
32 37parallel
Strand 6
A
180 185parallel
Strand 7
A
235 239parallel
Strand 8
A
257 259anti-parallel
Strand 9
A
206 207parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
135 136first strand
Strand 2
B
122 126parallel
Strand 3
B
151 155parallel
Strand 4
B
70 75parallel
Strand 5
B
32 37parallel
Strand 6
B
180 185parallel
Strand 7
B
235 239parallel
Strand 8
B
257 260anti-parallel
Strand 9
B
206 208parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
190 191first strand
Strand 2
B
203 204anti-parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
135 136first strand
Strand 2
C
122 126parallel
Strand 3
C
151 155parallel
Strand 4
C
70 75parallel
Strand 5
C
32 37parallel
Strand 6
C
180 185parallel
Strand 7
C
235 239parallel
Strand 8
C
257 260anti-parallel
Strand 9
C
206 208parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
190 191first strand
Strand 2
C
203 204anti-parallel
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There are 9 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
135 136first strand
Strand 2
D
122 126parallel
Strand 3
D
151 155parallel
Strand 4
D
70 75parallel
Strand 5
D
32 37parallel
Strand 6
D
180 184parallel
Strand 7
D
235 238parallel
Strand 8
D
257 259anti-parallel
Strand 9
D
206 207parallel
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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
135 136first strand
Strand 2
E
122 126parallel
Strand 3
E
151 155parallel
Strand 4
E
70 75parallel
Strand 5
E
32 37parallel
Strand 6
E
180 185parallel
Strand 7
E
235 239parallel
Strand 8
E
257 258anti-parallel
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There are 9 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
135 136first strand
Strand 2
F
122 126parallel
Strand 3
F
151 155parallel
Strand 4
F
70 75parallel
Strand 5
F
32 37parallel
Strand 6
F
180 185parallel
Strand 7
F
235 239parallel
Strand 8
F
257 259anti-parallel
Strand 9
F
206 207parallel
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