Analysis of interatomic Contacts of Structural Units in PDB entry:
3NY2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3NY2 entry

There are 8 chains in PDB entry 3NY2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 96GLU 167
B
 GLY 96GLU 167
C
 SER 97GLU 167
D
 LEU 95GLU 167
E
 LEU 98GLU 167
F
 GLY 96GLU 167
G
 LEU 95GLU 167
H
 GLY 96GLU 167
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 3NY2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
124 129Right-handed alpha
Helix 2
2
A
130 136Right-handed 310
Helix 3
3
B
124 130Right-handed alpha
Helix 4
4
B
131 136Right-handed 310
Helix 5
5
B
153 157Right-handed 310
Helix 6
6
C
124 130Right-handed alpha
Helix 7
7
C
131 136Right-handed 310
Helix 8
8
C
153 157Right-handed 310
Helix 9
9
D
124 130Right-handed alpha
Helix 10
10
D
131 136Right-handed 310
Helix 11
11
D
153 157Right-handed 310
Helix 12
12
E
124 130Right-handed alpha
Helix 13
13
E
131 136Right-handed 310
Helix 14
14
E
153 157Right-handed 310
Helix 15
15
F
124 130Right-handed alpha
Helix 16
16
F
131 136Right-handed 310
Helix 17
17
F
153 157Right-handed 310
Helix 18
18
G
124 130Right-handed alpha
Helix 19
19
G
131 136Right-handed 310
Helix 20
20
G
153 157Right-handed 310
Helix 21
21
H
124 130Right-handed alpha
Helix 22
22
H
131 136Right-handed 310
Helix 23
23
H
153 157Right-handed 310
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There are 8 sheets in PDB entry 3NY2. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 112first strand
Strand 2
A
138 142anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
108 112first strand
Strand 2
B
138 142anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
108 112first strand
Strand 2
C
138 142anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
108 112first strand
Strand 2
D
138 142anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
108 112first strand
Strand 2
E
138 142anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
108 112first strand
Strand 2
F
138 142anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
108 112first strand
Strand 2
G
138 142anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
108 112first strand
Strand 2
H
138 142anti-parallel
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