Analysis of interatomic Contacts of Structural Units in PDB entry:
3NZ4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3NZ4 entry

There are 4 chains in PDB entry 3NZ4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 7SER 174
A
 ASP 178GLY 678
B
 SER 7SER 174
B
 ASP 178LYS 655
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 3NZ4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 24Right-handed alpha
Helix 2
2
A
36 46Right-handed alpha
Helix 3
3
A
54 75Right-handed alpha
Helix 4
4
A
86 90Right-handed 310
Helix 5
5
A
96 109Right-handed alpha
Helix 6
6
A
125 141Right-handed alpha
Helix 7
7
A
148 161Right-handed alpha
Helix 8
8
A
178 190Right-handed alpha
Helix 9
9
A
207 214Right-handed alpha
Helix 10
10
A
224 231Right-handed alpha
Helix 11
11
A
233 266Right-handed alpha
Helix 12
12
A
268 272Right-handed 310
Helix 13
13
A
273 279Right-handed alpha
Helix 14
14
A
282 297Right-handed alpha
Helix 15
15
A
299 310Right-handed alpha
Helix 16
16
A
311 316Right-handed 310
Helix 17
17
A
321 326Right-handed alpha
Helix 18
18
A
326 350Right-handed alpha
Helix 19
19
A
360 363Right-handed 310
Helix 20
20
A
373 403Right-handed alpha
Helix 21
21
A
403 408Right-handed alpha
Helix 22
22
A
411 415Right-handed 310
Helix 23
23
A
419 423Right-handed 310
Helix 24
24
A
426 444Right-handed alpha
Helix 25
25
A
447 451Right-handed 310
Helix 26
26
A
464 518Right-handed alpha
Helix 27
27
A
521 535Right-handed alpha
Helix 28
28
A
536 540Right-handed 310
Helix 29
29
A
549 566Right-handed alpha
Helix 30
30
A
573 604Right-handed alpha
Helix 31
31
A
619 623Right-handed 310
Helix 32
32
A
625 634Right-handed alpha
Helix 33
33
A
648 663Right-handed alpha
Helix 34
34
A
665 674Right-handed alpha
Helix 35
35
B
9 24Right-handed alpha
Helix 36
36
B
36 46Right-handed alpha
Helix 37
37
B
58 74Right-handed alpha
Helix 38
38
B
86 90Right-handed 310
Helix 39
39
B
96 109Right-handed alpha
Helix 40
40
B
125 141Right-handed alpha
Helix 41
41
B
148 162Right-handed alpha
Helix 42
42
B
178 190Right-handed alpha
Helix 43
43
B
207 213Right-handed alpha
Helix 44
44
B
224 231Right-handed alpha
Helix 45
45
B
233 266Right-handed alpha
Helix 46
46
B
268 272Right-handed 310
Helix 47
47
B
273 279Right-handed alpha
Helix 48
48
B
282 297Right-handed alpha
Helix 49
49
B
299 311Right-handed alpha
Helix 50
50
B
312 316Right-handed 310
Helix 51
51
B
321 326Right-handed alpha
Helix 52
52
B
326 350Right-handed alpha
Helix 53
53
B
360 363Right-handed 310
Helix 54
54
B
373 403Right-handed alpha
Helix 55
55
B
411 415Right-handed 310
Helix 56
56
B
426 444Right-handed alpha
Helix 57
57
B
447 451Right-handed 310
Helix 58
58
B
464 518Right-handed alpha
Helix 59
59
B
521 535Right-handed alpha
Helix 60
60
B
536 540Right-handed 310
Helix 61
61
B
549 566Right-handed alpha
Helix 62
62
B
573 604Right-handed alpha
Helix 63
63
B
618 623Right-handed 310
Helix 64
64
B
625 634Right-handed alpha
Helix 65
65
B
648 663Right-handed alpha
Helix 66
66
B
665 674Right-handed alpha
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There are 6 sheets in PDB entry 3NZ4. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 29first strand
Strand 2
A
50 53parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 165first strand
Strand 2
A
196 199anti-parallel
Strand 3
A
204 206anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
357 359first strand
Strand 2
A
364 366anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 29first strand
Strand 2
B
50 53parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
163 165first strand
Strand 2
B
196 199anti-parallel
Strand 3
B
204 206anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
357 359first strand
Strand 2
B
364 366anti-parallel
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