Analysis of interatomic Contacts of Structural Units in PDB entry:
3NZQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3NZQ entry

There are 2 chains in PDB entry 3NZQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 34HIS 661
B
 LYS 34HIS 661
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 3NZQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
40 45Right-handed alpha
Helix 2
2
A
72 82Right-handed alpha
Helix 3
3
A
92 115Right-handed alpha
Helix 4
4
A
127 129Right-handed 310
Helix 5
5
A
131 140Right-handed alpha
Helix 6
6
A
151 163Right-handed alpha
Helix 7
7
A
176 189Right-handed alpha
Helix 8
8
A
199 213Right-handed alpha
Helix 9
9
A
246 260Right-handed alpha
Helix 10
10
A
279 299Right-handed alpha
Helix 11
11
A
331 351Right-handed alpha
Helix 12
12
A
361 367Right-handed alpha
Helix 13
13
A
395 409Right-handed alpha
Helix 14
14
A
416 437Right-handed alpha
Helix 15
15
A
441 463Right-handed alpha
Helix 16
16
A
467 469Right-handed 310
Helix 17
17
A
470 480Right-handed alpha
Helix 18
18
A
490 495Right-handed alpha
Helix 19
19
A
496 501Right-handed alpha
Helix 20
20
A
569 573Right-handed 310
Helix 21
21
A
605 613Right-handed alpha
Helix 22
22
A
616 628Right-handed alpha
Helix 23
23
A
629 632Right-handed 310
Helix 24
24
A
634 650Right-handed alpha
Helix 25
25
B
40 45Right-handed alpha
Helix 26
26
B
72 82Right-handed alpha
Helix 27
27
B
92 115Right-handed alpha
Helix 28
28
B
127 129Right-handed 310
Helix 29
29
B
131 140Right-handed alpha
Helix 30
30
B
151 163Right-handed alpha
Helix 31
31
B
176 189Right-handed alpha
Helix 32
32
B
199 213Right-handed alpha
Helix 33
33
B
246 260Right-handed alpha
Helix 34
34
B
279 299Right-handed alpha
Helix 35
35
B
331 351Right-handed alpha
Helix 36
36
B
361 367Right-handed alpha
Helix 37
37
B
395 409Right-handed alpha
Helix 38
38
B
416 438Right-handed alpha
Helix 39
39
B
441 463Right-handed alpha
Helix 40
40
B
467 469Right-handed 310
Helix 41
41
B
470 480Right-handed alpha
Helix 42
42
B
490 495Right-handed alpha
Helix 43
43
B
496 501Right-handed alpha
Helix 44
44
B
569 573Right-handed 310
Helix 45
45
B
605 613Right-handed alpha
Helix 46
46
B
616 628Right-handed alpha
Helix 47
47
B
629 632Right-handed 310
Helix 48
48
B
634 650Right-handed alpha
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There are 10 sheets in PDB entry 3NZQ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 51first strand
Strand 2
A
57 59anti-parallel
Strand 3
A
70 71anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
507 509first strand
Strand 2
A
559 562anti-parallel
Strand 3
A
370 380anti-parallel
Strand 4
A
483 487anti-parallel
Strand 5
A
519 525parallel
Strand 6
A
547 549anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
507 509first strand
Strand 2
A
559 562anti-parallel
Strand 3
A
370 380anti-parallel
Strand 4
A
88 91anti-parallel
Strand 5
A
583 589parallel
Strand 6
A
595 601anti-parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 125first strand
Strand 2
A
145 149parallel
Strand 3
A
168 171parallel
Strand 4
A
192 197parallel
Strand 5
A
219 222parallel
Strand 6
A
266 270parallel
Strand 7
A
306 308parallel
Strand 8
A
356 359parallel
Strand 9
A
120 125parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
537 539first strand
Strand 2
A
542 544anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
49 51first strand
Strand 2
B
57 59anti-parallel
Strand 3
B
70 71anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
507 509first strand
Strand 2
B
559 562anti-parallel
Strand 3
B
370 380anti-parallel
Strand 4
B
483 487anti-parallel
Strand 5
B
519 525parallel
Strand 6
B
547 549anti-parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
507 509first strand
Strand 2
B
559 562anti-parallel
Strand 3
B
370 380anti-parallel
Strand 4
B
88 91anti-parallel
Strand 5
B
583 589parallel
Strand 6
B
595 601anti-parallel
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There are 9 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
120 125first strand
Strand 2
B
145 149parallel
Strand 3
B
168 171parallel
Strand 4
B
192 197parallel
Strand 5
B
219 222parallel
Strand 6
B
266 270parallel
Strand 7
B
306 308parallel
Strand 8
B
356 359parallel
Strand 9
B
120 125parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
537 539first strand
Strand 2
B
542 544anti-parallel
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