Analysis of interatomic Contacts of Structural Units in PDB entry:
3NZT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3NZT entry

There is 1 chain in PDB entry 3NZT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 2CYS 501
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 25 helices in PDB entry 3NZT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
32 36Right-handed 310
Helix 2
2
A
62 81Right-handed alpha
Helix 3
3
A
97 101Right-handed 310
Helix 4
4
A
109 127Right-handed alpha
Helix 5
5
A
128 133Right-handed 310
Helix 6
6
A
143 155Right-handed alpha
Helix 7
7
A
157 173Right-handed alpha
Helix 8
8
A
174 181Right-handed alpha
Helix 9
9
A
189 191Right-handed 310
Helix 10
10
A
213 217Right-handed 310
Helix 11
11
A
223 228Right-handed alpha
Helix 12
12
A
235 249Right-handed alpha
Helix 13
13
A
251 258Right-handed alpha
Helix 14
14
A
276 280Right-handed 310
Helix 15
15
A
295 304Right-handed alpha
Helix 16
16
A
324 341Right-handed alpha
Helix 17
17
A
347 365Right-handed alpha
Helix 18
18
A
383 399Right-handed alpha
Helix 19
19
A
402 418Right-handed alpha
Helix 20
20
A
419 421Right-handed 310
Helix 21
21
A
422 435Right-handed alpha
Helix 22
22
A
435 454Right-handed alpha
Helix 23
23
A
457 482Right-handed alpha
Helix 24
24
A
485 496Right-handed alpha
Helix 25
25
A
497 499Right-handed 310
Back to top of page

There are 4 sheets in PDB entry 3NZT. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 46first strand
Strand 2
A
52 56anti-parallel
Strand 3
A
10 21anti-parallel
Strand 4
A
85 87anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 46first strand
Strand 2
A
52 56anti-parallel
Strand 3
A
10 21anti-parallel
Strand 4
A
136 141anti-parallel
Strand 5
A
307 310anti-parallel
Strand 6
A
284 287anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 187first strand
Strand 2
A
205 207anti-parallel
Strand 3
A
199 200anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
371 373first strand
Strand 2
A
380 382anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il