Analysis of interatomic Contacts of Structural Units in PDB entry:
3O05


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3O05 entry

There are 3 chains in PDB entry 3O05 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 15MET 275
B
 MET 15MET 275
C
 MET 15MET 275
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 3O05. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
26 37Right-handed alpha
Helix 2
2
A
47 53Right-handed alpha
Helix 3
3
A
62 71Right-handed alpha
Helix 4
4
A
85 95Right-handed alpha
Helix 5
5
A
116 120Right-handed 310
Helix 6
6
A
130 141Right-handed alpha
Helix 7
7
A
156 175Right-handed alpha
Helix 8
8
A
178 190Right-handed alpha
Helix 9
9
A
192 203Right-handed alpha
Helix 10
10
A
217 227Right-handed alpha
Helix 11
11
A
236 241Right-handed alpha
Helix 12
12
A
243 257Right-handed alpha
Helix 13
13
A
260 269Right-handed alpha
Helix 14
14
B
26 37Right-handed alpha
Helix 15
15
B
47 53Right-handed alpha
Helix 16
16
B
62 71Right-handed alpha
Helix 17
17
B
85 95Right-handed alpha
Helix 18
18
B
116 120Right-handed 310
Helix 19
19
B
130 140Right-handed alpha
Helix 20
20
B
156 175Right-handed alpha
Helix 21
21
B
178 190Right-handed alpha
Helix 22
22
B
192 203Right-handed alpha
Helix 23
23
B
217 227Right-handed alpha
Helix 24
24
B
236 241Right-handed alpha
Helix 25
25
B
243 257Right-handed alpha
Helix 26
26
B
260 269Right-handed alpha
Helix 27
27
C
26 37Right-handed alpha
Helix 28
28
C
47 53Right-handed alpha
Helix 29
29
C
62 71Right-handed alpha
Helix 30
30
C
85 95Right-handed alpha
Helix 31
31
C
116 120Right-handed 310
Helix 32
32
C
130 140Right-handed alpha
Helix 33
33
C
156 175Right-handed alpha
Helix 34
34
C
178 190Right-handed alpha
Helix 35
35
C
192 203Right-handed alpha
Helix 36
36
C
217 227Right-handed alpha
Helix 37
37
C
236 241Right-handed alpha
Helix 38
38
C
243 257Right-handed alpha
Helix 39
39
C
260 269Right-handed alpha
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There are 3 sheets in PDB entry 3O05. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 210first strand
Strand 2
A
144 147parallel
Strand 3
A
124 128parallel
Strand 4
A
99 103parallel
Strand 5
A
77 82parallel
Strand 6
A
40 43parallel
Strand 7
A
20 24parallel
Strand 8
A
232 234parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
209 210first strand
Strand 2
B
144 147parallel
Strand 3
B
124 128parallel
Strand 4
B
99 103parallel
Strand 5
B
77 82parallel
Strand 6
B
40 43parallel
Strand 7
B
20 24parallel
Strand 8
B
232 234parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
209 210first strand
Strand 2
C
144 147parallel
Strand 3
C
124 128parallel
Strand 4
C
99 103parallel
Strand 5
C
77 82parallel
Strand 6
C
40 43parallel
Strand 7
C
20 24parallel
Strand 8
C
232 234parallel
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