Analysis of interatomic Contacts of Structural Units in PDB entry:
3O0K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3O0K entry

There are 4 chains in PDB entry 3O0K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 17ASP 279
B
 THR 21ASP 279
C
 THR 21ASP 279
D
 THR 21ASP 279
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 3O0K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
44 59Right-handed alpha
Helix 2
2
A
66 70Right-handed 310
Helix 3
3
A
71 81Right-handed alpha
Helix 4
4
A
85 89Right-handed 310
Helix 5
5
A
96 100Right-handed 310
Helix 6
6
A
101 117Right-handed alpha
Helix 7
7
A
132 149Right-handed alpha
Helix 8
8
A
161 173Right-handed alpha
Helix 9
9
A
189 199Right-handed alpha
Helix 10
10
A
217 228Right-handed alpha
Helix 11
11
A
230 243Right-handed alpha
Helix 12
12
A
252 261Right-handed alpha
Helix 13
13
A
268 277Right-handed alpha
Helix 14
14
B
44 59Right-handed alpha
Helix 15
15
B
66 70Right-handed 310
Helix 16
16
B
71 81Right-handed alpha
Helix 17
17
B
85 89Right-handed 310
Helix 18
18
B
96 100Right-handed 310
Helix 19
19
B
101 117Right-handed alpha
Helix 20
20
B
132 149Right-handed alpha
Helix 21
21
B
161 173Right-handed alpha
Helix 22
22
B
189 199Right-handed alpha
Helix 23
23
B
217 228Right-handed alpha
Helix 24
24
B
230 242Right-handed alpha
Helix 25
25
B
252 261Right-handed alpha
Helix 26
26
B
268 277Right-handed alpha
Helix 27
27
C
44 59Right-handed alpha
Helix 28
28
C
66 70Right-handed 310
Helix 29
29
C
71 82Right-handed alpha
Helix 30
30
C
85 89Right-handed 310
Helix 31
31
C
96 100Right-handed 310
Helix 32
32
C
101 117Right-handed alpha
Helix 33
33
C
132 149Right-handed alpha
Helix 34
34
C
161 173Right-handed alpha
Helix 35
35
C
189 199Right-handed alpha
Helix 36
36
C
217 228Right-handed alpha
Helix 37
37
C
230 243Right-handed alpha
Helix 38
38
C
252 261Right-handed alpha
Helix 39
39
C
268 277Right-handed alpha
Helix 40
40
D
44 59Right-handed alpha
Helix 41
41
D
66 70Right-handed 310
Helix 42
42
D
71 82Right-handed alpha
Helix 43
43
D
85 89Right-handed 310
Helix 44
44
D
96 100Right-handed 310
Helix 45
45
D
101 117Right-handed alpha
Helix 46
46
D
132 149Right-handed alpha
Helix 47
47
D
161 173Right-handed alpha
Helix 48
48
D
189 199Right-handed alpha
Helix 49
49
D
217 228Right-handed alpha
Helix 50
50
D
230 243Right-handed alpha
Helix 51
51
D
252 261Right-handed alpha
Helix 52
52
D
268 277Right-handed alpha
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There are 8 sheets in PDB entry 3O0K. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 19first strand
Strand 2
B
24 26anti-parallel
Strand 3
B
32 34anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 26first strand
Strand 2
A
32 34anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 39first strand
Strand 2
A
62 64parallel
Strand 3
A
90 95parallel
Strand 4
A
121 126parallel
Strand 5
A
152 158parallel
Strand 6
A
178 182parallel
Strand 7
A
202 206parallel
Strand 8
A
245 246parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 39first strand
Strand 2
B
62 64parallel
Strand 3
B
90 95parallel
Strand 4
B
121 126parallel
Strand 5
B
152 158parallel
Strand 6
B
178 182parallel
Strand 7
B
202 206parallel
Strand 8
B
245 246parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
24 26first strand
Strand 2
C
32 34anti-parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
38 39first strand
Strand 2
C
62 64parallel
Strand 3
C
90 95parallel
Strand 4
C
121 126parallel
Strand 5
C
152 158parallel
Strand 6
C
178 182parallel
Strand 7
C
202 206parallel
Strand 8
C
245 247parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
24 26first strand
Strand 2
D
32 34anti-parallel
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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
38 39first strand
Strand 2
D
62 64parallel
Strand 3
D
90 95parallel
Strand 4
D
121 126parallel
Strand 5
D
152 158parallel
Strand 6
D
178 182parallel
Strand 7
D
202 206parallel
Strand 8
D
245 246parallel
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