Analysis of interatomic Contacts of Structural Units in PDB entry:
3O0P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3O0P entry

There is 1 chain in PDB entry 3O0P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 47LEU 252
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 3O0P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
48 57Right-handed alpha
Helix 2
2
A
59 76Right-handed alpha
Helix 3
3
A
78 82Right-handed 310
Helix 4
4
A
99 103Right-handed 310
Helix 5
5
A
114 117Right-handed 310
Helix 6
6
A
127 132Right-handed alpha
Helix 7
7
A
168 172Right-handed 310
Helix 8
8
A
202 206Right-handed 310
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There is 1 sheet ( A) in PDB entry 3O0P.

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 113first strand
Strand 2
A
118 123anti-parallel
Strand 3
A
135 137parallel
Strand 4
A
150 155anti-parallel
Strand 5
A
212 220parallel
Strand 6
A
227 236anti-parallel
Strand 7
A
186 197anti-parallel
Strand 8
A
177 181anti-parallel
Strand 9
A
109 113anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il