Analysis of interatomic Contacts of Structural Units in PDB entry:
3O0Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3O0Y entry

There are 3 chains in PDB entry 3O0Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 24LYS 609
B
 ILE 25LYS 609
C
 ILE 25LYS 609
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are103 helices in PDB entry 3O0Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
26 45Right-handed alpha
Helix 2
2
A
46 54Right-handed alpha
Helix 3
3
A
56 61Right-handed alpha
Helix 4
4
A
72 93Right-handed alpha
Helix 5
5
A
99 118Right-handed alpha
Helix 6
6
A
143 155Right-handed alpha
Helix 7
7
A
160 173Right-handed alpha
Helix 8
8
A
173 191Right-handed alpha
Helix 9
9
A
196 211Right-handed alpha
Helix 10
10
A
214 217Right-handed 310
Helix 11
11
A
218 229Right-handed alpha
Helix 12
12
A
235 253Right-handed alpha
Helix 13
13
A
253 269Right-handed alpha
Helix 14
14
A
277 281Right-handed 310
Helix 15
15
A
283 297Right-handed alpha
Helix 16
16
A
301 327Right-handed alpha
Helix 17
17
A
333 343Right-handed alpha
Helix 18
18
A
344 348Right-handed 310
Helix 19
19
A
352 374Right-handed alpha
Helix 20
20
A
375 378Right-handed 310
Helix 21
21
A
392 397Right-handed alpha
Helix 22
22
A
423 427Right-handed 310
Helix 23
23
A
428 430Right-handed 310
Helix 24
24
A
431 440Right-handed alpha
Helix 25
25
A
443 453Right-handed alpha
Helix 26
26
A
458 463Right-handed alpha
Helix 27
27
A
466 484Right-handed alpha
Helix 28
28
A
490 516Right-handed alpha
Helix 29
29
A
520 533Right-handed alpha
Helix 30
30
A
535 549Right-handed alpha
Helix 31
31
A
551 553Right-handed 310
Helix 32
32
A
554 575Right-handed alpha
Helix 33
33
A
576 578Right-handed 310
Helix 34
34
A
579 589Right-handed alpha
Helix 35
35
A
594 609Right-handed alpha
Helix 36
36
B
26 45Right-handed alpha
Helix 37
37
B
46 54Right-handed alpha
Helix 38
38
B
56 61Right-handed alpha
Helix 39
39
B
72 93Right-handed alpha
Helix 40
40
B
99 118Right-handed alpha
Helix 41
41
B
143 155Right-handed alpha
Helix 42
42
B
160 172Right-handed alpha
Helix 43
43
B
173 191Right-handed alpha
Helix 44
44
B
196 211Right-handed alpha
Helix 45
45
B
214 217Right-handed 310
Helix 46
46
B
218 229Right-handed alpha
Helix 47
47
B
235 253Right-handed alpha
Helix 48
48
B
253 269Right-handed alpha
Helix 49
49
B
277 281Right-handed 310
Helix 50
50
B
283 296Right-handed alpha
Helix 51
51
B
301 327Right-handed alpha
Helix 52
52
B
333 343Right-handed alpha
Helix 53
53
B
344 348Right-handed 310
Helix 54
54
B
352 374Right-handed alpha
Helix 55
55
B
375 378Right-handed 310
Helix 56
56
B
392 397Right-handed alpha
Helix 57
57
B
423 427Right-handed 310
Helix 58
58
B
428 430Right-handed 310
Helix 59
59
B
431 440Right-handed alpha
Helix 60
60
B
443 453Right-handed alpha
Helix 61
61
B
458 463Right-handed alpha
Helix 62
62
B
466 484Right-handed alpha
Helix 63
63
B
490 516Right-handed alpha
Helix 64
64
B
520 532Right-handed alpha
Helix 65
65
B
535 549Right-handed alpha
Helix 66
66
B
551 553Right-handed 310
Helix 67
67
B
554 575Right-handed alpha
Helix 68
68
B
576 578Right-handed 310
Helix 69
69
B
579 589Right-handed alpha
Helix 70
70
B
594 608Right-handed alpha
Helix 71
71
C
26 45Right-handed alpha
Helix 72
72
C
46 54Right-handed alpha
Helix 73
73
C
56 61Right-handed alpha
Helix 74
74
C
72 93Right-handed alpha
Helix 75
75
C
99 118Right-handed alpha
Helix 76
76
C
143 155Right-handed alpha
Helix 77
77
C
160 172Right-handed alpha
Helix 78
78
C
173 191Right-handed alpha
Helix 79
79
C
196 211Right-handed alpha
Helix 80
80
C
214 217Right-handed 310
Helix 81
81
C
218 229Right-handed alpha
Helix 82
82
C
235 253Right-handed alpha
Helix 83
83
C
253 269Right-handed alpha
Helix 84
84
C
277 281Right-handed 310
Helix 85
85
C
283 297Right-handed alpha
Helix 86
86
C
301 327Right-handed alpha
Helix 87
87
C
333 343Right-handed alpha
Helix 88
88
C
344 348Right-handed 310
Helix 89
89
C
352 374Right-handed alpha
Helix 90
90
C
375 378Right-handed 310
Helix 91
91
C
423 427Right-handed 310
Helix 92
92
C
428 440Right-handed alpha
Helix 93
93
C
443 453Right-handed alpha
Helix 94
94
C
458 463Right-handed alpha
Helix 95
95
C
466 484Right-handed alpha
Helix 96
96
C
490 516Right-handed alpha
Helix 97
97
C
520 532Right-handed alpha
Helix 98
98
C
535 549Right-handed alpha
Helix 99
99
C
551 553Right-handed 310
Helix 100
100
C
554 575Right-handed alpha
Helix 101
101
C
576 578Right-handed 310
Helix 102
102
C
579 589Right-handed alpha
Helix 103
103
C
594 608Right-handed alpha
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There are 6 sheets in PDB entry 3O0Y. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 128first strand
Strand 2
A
132 134anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 390first strand
Strand 2
A
416 419parallel
Strand 3
A
402 405anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
126 128first strand
Strand 2
B
132 134anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
386 390first strand
Strand 2
B
415 419parallel
Strand 3
B
402 405anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
126 128first strand
Strand 2
C
132 134anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
386 390first strand
Strand 2
C
415 419parallel
Strand 3
C
402 405anti-parallel
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