Analysis of interatomic Contacts of Structural Units in PDB entry:
3O14


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3O14 entry

There are 2 chains in PDB entry 3O14 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0GLU 221
B
 GLY 0GLU 221
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 3O14. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 18Right-handed 310
Helix 2
2
A
213 217Right-handed 310
Helix 3
3
B
16 18Right-handed 310
Helix 4
4
B
124 127Right-handed 310
Helix 5
5
B
213 217Right-handed 310
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There are 12 sheets in PDB entry 3O14. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 14first strand
Strand 2
A
186 190anti-parallel
Strand 3
A
166 177anti-parallel
Strand 4
A
196 211anti-parallel
Strand 5
A
157 160anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 141first strand
Strand 2
A
146 152anti-parallel
Strand 3
A
196 211anti-parallel
Strand 4
A
166 177anti-parallel
Strand 5
A
180 183anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 22first strand
Strand 2
A
28 36anti-parallel
Strand 3
A
42 49anti-parallel
Strand 4
A
102 108anti-parallel
Strand 5
A
64 75anti-parallel
Strand 6
A
78 81anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 22first strand
Strand 2
A
28 36anti-parallel
Strand 3
A
42 49anti-parallel
Strand 4
A
102 108anti-parallel
Strand 5
A
64 75anti-parallel
Strand 6
A
84 88anti-parallel
Strand 7
A
119 122anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 54first strand
Strand 2
A
97 98anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 59first strand
Strand 2
A
93 94anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 14first strand
Strand 2
B
186 190anti-parallel
Strand 3
B
166 177anti-parallel
Strand 4
B
196 211anti-parallel
Strand 5
B
157 160anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
134 141first strand
Strand 2
B
146 152anti-parallel
Strand 3
B
196 211anti-parallel
Strand 4
B
166 177anti-parallel
Strand 5
B
180 182anti-parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
21 22first strand
Strand 2
B
28 36anti-parallel
Strand 3
B
42 49anti-parallel
Strand 4
B
102 108anti-parallel
Strand 5
B
64 75anti-parallel
Strand 6
B
78 81anti-parallel
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There are 7 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
21 22first strand
Strand 2
B
28 36anti-parallel
Strand 3
B
42 49anti-parallel
Strand 4
B
102 108anti-parallel
Strand 5
B
64 75anti-parallel
Strand 6
B
84 88anti-parallel
Strand 7
B
119 122anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 54first strand
Strand 2
B
97 98anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 59first strand
Strand 2
B
93 94anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il