Analysis of interatomic Contacts of Structural Units in PDB entry:
3O2P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3O2P entry

There are 2 chains in PDB entry 3O2P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 71GLN 269
E
 ASN 730ALA 815
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 3O2P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
72 83Right-handed alpha
Helix 2
2
A
89 100Right-handed alpha
Helix 3
3
A
106 117Right-handed alpha
Helix 4
4
A
126 137Right-handed alpha
Helix 5
5
A
141 159Right-handed alpha
Helix 6
6
A
159 175Right-handed alpha
Helix 7
7
A
184 195Right-handed alpha
Helix 8
8
A
204 218Right-handed alpha
Helix 9
9
A
224 238Right-handed alpha
Helix 10
10
A
242 248Right-handed alpha
Helix 11
11
A
255 269Right-handed alpha
Helix 12
12
E
734 763Right-handed alpha
Helix 13
13
E
767 779Right-handed alpha
Helix 14
14
E
785 799Right-handed alpha
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There are 2 sheets in PDB entry 3O2P. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 183first strand
Strand 2
A
222 223anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
764 766first strand
Strand 2
E
810 813anti-parallel
Strand 3
E
802 804anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il