Analysis of interatomic Contacts of Structural Units in PDB entry:
3O3W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3O3W entry

There are 9 chains in PDB entry 3O3W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 14GLY 131
B
 ASN 17GLU 133
C
 ALA 16GLU 133
D
 ASN 17ASN 130
E
 ALA 16GLU 133
F
 PRO 15HIS 134
G
 ASN 17ASN 130
H
 ASN 17LEU 132
I
 ALA 16LEU 132
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 54 helices in PDB entry 3O3W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 31Right-handed alpha
Helix 2
2
A
34 44Right-handed alpha
Helix 3
3
A
56 63Right-handed alpha
Helix 4
4
A
72 76Right-handed 310
Helix 5
5
A
100 112Right-handed alpha
Helix 6
6
A
121 131Right-handed alpha
Helix 7
7
B
17 31Right-handed alpha
Helix 8
8
B
34 45Right-handed alpha
Helix 9
9
B
56 63Right-handed alpha
Helix 10
10
B
72 76Right-handed 310
Helix 11
11
B
100 112Right-handed alpha
Helix 12
12
B
121 130Right-handed alpha
Helix 13
13
C
17 31Right-handed alpha
Helix 14
14
C
34 45Right-handed alpha
Helix 15
15
C
56 63Right-handed alpha
Helix 16
16
C
72 76Right-handed 310
Helix 17
17
C
100 112Right-handed alpha
Helix 18
18
C
121 130Right-handed alpha
Helix 19
19
D
17 31Right-handed alpha
Helix 20
20
D
34 44Right-handed alpha
Helix 21
21
D
56 63Right-handed alpha
Helix 22
22
D
72 76Right-handed 310
Helix 23
23
D
100 112Right-handed alpha
Helix 24
24
D
121 130Right-handed alpha
Helix 25
25
E
17 31Right-handed alpha
Helix 26
26
E
34 44Right-handed alpha
Helix 27
27
E
56 63Right-handed alpha
Helix 28
28
E
72 76Right-handed 310
Helix 29
29
E
100 112Right-handed alpha
Helix 30
30
E
121 130Right-handed alpha
Helix 31
31
F
17 31Right-handed alpha
Helix 32
32
F
34 45Right-handed alpha
Helix 33
33
F
56 63Right-handed alpha
Helix 34
34
F
72 76Right-handed 310
Helix 35
35
F
100 112Right-handed alpha
Helix 36
36
F
121 130Right-handed alpha
Helix 37
37
G
17 31Right-handed alpha
Helix 38
38
G
34 45Right-handed alpha
Helix 39
39
G
56 63Right-handed alpha
Helix 40
40
G
72 76Right-handed 310
Helix 41
41
G
100 112Right-handed alpha
Helix 42
42
G
121 130Right-handed alpha
Helix 43
43
H
17 31Right-handed alpha
Helix 44
44
H
34 45Right-handed alpha
Helix 45
45
H
56 63Right-handed alpha
Helix 46
46
H
72 76Right-handed 310
Helix 47
47
H
100 112Right-handed alpha
Helix 48
48
H
121 130Right-handed alpha
Helix 49
49
I
17 31Right-handed alpha
Helix 50
50
I
34 43Right-handed alpha
Helix 51
51
I
56 63Right-handed alpha
Helix 52
52
I
72 76Right-handed 310
Helix 53
53
I
100 112Right-handed alpha
Helix 54
54
I
121 130Right-handed alpha
Back to top of page

There are 9 sheets in PDB entry 3O3W. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 33first strand
Strand 2
A
115 119parallel
Strand 3
A
89 93parallel
Strand 4
A
49 53parallel
Strand 5
A
69 70parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 33first strand
Strand 2
B
115 119parallel
Strand 3
B
89 93parallel
Strand 4
B
49 53parallel
Strand 5
B
69 70parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
32 33first strand
Strand 2
C
115 119parallel
Strand 3
C
89 93parallel
Strand 4
C
49 53parallel
Strand 5
C
69 70parallel
Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
32 33first strand
Strand 2
D
115 119parallel
Strand 3
D
89 93parallel
Strand 4
D
49 53parallel
Strand 5
D
69 70parallel
Back to list of sheets
Back to top of page

There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
32 33first strand
Strand 2
E
115 119parallel
Strand 3
E
89 93parallel
Strand 4
E
49 53parallel
Strand 5
E
69 70parallel
Back to list of sheets
Back to top of page

There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
32 33first strand
Strand 2
F
115 119parallel
Strand 3
F
89 93parallel
Strand 4
F
49 53parallel
Strand 5
F
69 70parallel
Back to list of sheets
Back to top of page

There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
32 33first strand
Strand 2
G
115 119parallel
Strand 3
G
89 93parallel
Strand 4
G
49 53parallel
Strand 5
G
69 70parallel
Back to list of sheets
Back to top of page

There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
32 33first strand
Strand 2
H
115 119parallel
Strand 3
H
89 93parallel
Strand 4
H
49 53parallel
Strand 5
H
69 70parallel
Back to list of sheets
Back to top of page

There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
32 33first strand
Strand 2
I
115 119parallel
Strand 3
I
89 93parallel
Strand 4
I
49 53parallel
Strand 5
I
69 70parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il