Analysis of interatomic Contacts of Structural Units in PDB entry:
3O4H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3O4H entry

There are 3 chains in PDB entry 3O4H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
PRO 6ARG 581
B
VAL 7GLU 580
C
MET 5PHE 197
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 55 helices in PDB entry 3O4H. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
8 22Right-handed alpha
Helix 2
2
A
238 244Right-handed alpha
Helix 3
3
A
323 329Right-handed alpha
Helix 4
4
A
379 388Right-handed alpha
Helix 5
5
A
404 410Right-handed alpha
Helix 6
6
A
417 433Right-handed alpha
Helix 7
7
A
445 458Right-handed alpha
Helix 8
8
A
473 480Right-handed alpha
Helix 9
9
A
482 493Right-handed alpha
Helix 10
10
A
496 503Right-handed alpha
Helix 11
11
A
504 512Right-handed 310
Helix 12
12
A
528 542Right-handed alpha
Helix 13
13
A
560 580Right-handed alpha
Helix 14
14
B
8 22Right-handed alpha
Helix 15
15
B
238 244Right-handed alpha
Helix 16
16
B
323 329Right-handed alpha
Helix 17
17
B
379 388Right-handed alpha
Helix 18
18
B
404 410Right-handed alpha
Helix 19
19
B
417 433Right-handed alpha
Helix 20
20
B
445 458Right-handed alpha
Helix 21
21
B
473 481Right-handed alpha
Helix 22
22
B
482 493Right-handed alpha
Helix 23
23
B
496 503Right-handed alpha
Helix 24
24
B
504 512Right-handed 310
Helix 25
25
B
529 542Right-handed alpha
Helix 26
26
B
560 568Right-handed alpha
Helix 27
27
B
568 580Right-handed alpha
Helix 28
28
C
8 22Right-handed alpha
Helix 29
29
C
238 244Right-handed alpha
Helix 30
30
C
323 329Right-handed alpha
Helix 31
31
C
379 388Right-handed alpha
Helix 32
32
C
404 410Right-handed alpha
Helix 33
33
C
417 433Right-handed alpha
Helix 34
34
C
445 458Right-handed alpha
Helix 35
35
C
473 481Right-handed alpha
Helix 36
36
C
482 494Right-handed alpha
Helix 37
37
C
496 503Right-handed alpha
Helix 38
38
C
504 512Right-handed 310
Helix 39
39
C
529 542Right-handed alpha
Helix 40
40
C
560 581Right-handed alpha
Helix 41
41
D
8 22Right-handed alpha
Helix 42
42
D
238 244Right-handed alpha
Helix 43
43
D
323 329Right-handed alpha
Helix 44
44
D
341 343Right-handed 310
Helix 45
45
D
379 388Right-handed alpha
Helix 46
46
D
404 410Right-handed alpha
Helix 47
47
D
417 433Right-handed alpha
Helix 48
48
D
445 458Right-handed alpha
Helix 49
49
D
473 481Right-handed alpha
Helix 50
50
D
482 493Right-handed alpha
Helix 51
51
D
496 503Right-handed alpha
Helix 52
52
D
504 512Right-handed 310
Helix 53
53
D
528 542Right-handed alpha
Helix 54
54
D
560 568Right-handed alpha
Helix 55
55
D
568 581Right-handed alpha
Back to top of page

There are 30 sheets in PDB entry 3O4H. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
24 31first strand
Strand 2
A
35 42anti-parallel
Strand 3
A
45 52anti-parallel
Strand 4
A
55 58anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
66 67first strand
Strand 2
A
76 82anti-parallel
Strand 3
A
90 96anti-parallel
Strand 4
A
104 105anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
69 70first strand
Strand 2
A
113 119parallel
Strand 3
A
124 129anti-parallel
Strand 4
A
134 140anti-parallel
Strand 5
A
143 150anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
154 160first strand
Strand 2
A
163 171anti-parallel
Strand 3
A
174 181anti-parallel
Strand 4
A
188 190anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
196 202first strand
Strand 2
A
208 213anti-parallel
Strand 3
A
218 223anti-parallel
Strand 4
A
230 232anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
247 253first strand
Strand 2
A
259 265anti-parallel
Strand 3
A
268 273anti-parallel
Strand 4
A
276 278anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
284 291first strand
Strand 2
A
294 301anti-parallel
Strand 3
A
304 311anti-parallel
Strand 4
A
316 318anti-parallel
Back to list of sheets
Back to top of page

There are 16 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
330 339first strand
Strand 2
A
345 353anti-parallel
Strand 3
A
391 395anti-parallel
Strand 4
A
360 366parallel
Strand 5
A
436 444parallel
Strand 6
A
465 468parallel
Strand 7
A
516 521parallel
Strand 8
A
546 551parallel
Strand 9
B
546 551anti-parallel
Strand 10
B
516 521parallel
Strand 11
B
464 468parallel
Strand 12
B
436 444parallel
Strand 13
B
360 366parallel
Strand 14
B
391 395parallel
Strand 15
B
345 353anti-parallel
Strand 16
B
330 339anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
24 31first strand
Strand 2
B
35 41anti-parallel
Strand 3
B
46 51anti-parallel
Strand 4
B
56 58anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
66 67first strand
Strand 2
B
76 82anti-parallel
Strand 3
B
90 96anti-parallel
Strand 4
B
103 105anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
69 70first strand
Strand 2
B
113 119parallel
Strand 3
B
124 129anti-parallel
Strand 4
B
134 140anti-parallel
Strand 5
B
143 150anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
154 160first strand
Strand 2
B
163 168anti-parallel
Strand 3
B
176 181anti-parallel
Strand 4
B
188 190anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
196 202first strand
Strand 2
B
208 213anti-parallel
Strand 3
B
219 223anti-parallel
Strand 4
B
230 232anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
247 253first strand
Strand 2
B
259 265anti-parallel
Strand 3
B
268 273anti-parallel
Strand 4
B
276 278anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
284 291first strand
Strand 2
B
294 301anti-parallel
Strand 3
B
304 311anti-parallel
Strand 4
B
316 318anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
24 31first strand
Strand 2
C
35 42anti-parallel
Strand 3
C
45 52anti-parallel
Strand 4
C
55 58anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
66 67first strand
Strand 2
C
76 82anti-parallel
Strand 3
C
90 96anti-parallel
Strand 4
C
104 105anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
69 70first strand
Strand 2
C
113 119parallel
Strand 3
C
124 129anti-parallel
Strand 4
C
134 140anti-parallel
Strand 5
C
143 150anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
154 160first strand
Strand 2
C
163 171anti-parallel
Strand 3
C
174 181anti-parallel
Strand 4
C
188 190anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
195 202first strand
Strand 2
C
208 214anti-parallel
Strand 3
C
218 223anti-parallel
Strand 4
C
230 232anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
247 253first strand
Strand 2
C
259 265anti-parallel
Strand 3
C
268 273anti-parallel
Strand 4
C
276 278anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
284 291first strand
Strand 2
C
294 301anti-parallel
Strand 3
C
304 311anti-parallel
Strand 4
C
316 318anti-parallel
Back to list of sheets
Back to top of page

There are 16 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
330 339first strand
Strand 2
C
345 353anti-parallel
Strand 3
C
391 395anti-parallel
Strand 4
C
360 366parallel
Strand 5
C
436 444parallel
Strand 6
C
465 468parallel
Strand 7
C
516 521parallel
Strand 8
C
546 551parallel
Strand 9
D
546 551anti-parallel
Strand 10
D
516 521parallel
Strand 11
D
464 468parallel
Strand 12
D
436 444parallel
Strand 13
D
360 366parallel
Strand 14
D
391 395parallel
Strand 15
D
345 353anti-parallel
Strand 16
D
330 339anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
24 31first strand
Strand 2
D
35 41anti-parallel
Strand 3
D
46 52anti-parallel
Strand 4
D
55 58anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
66 67first strand
Strand 2
D
76 82anti-parallel
Strand 3
D
90 96anti-parallel
Strand 4
D
103 105anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
69 70first strand
Strand 2
D
113 119parallel
Strand 3
D
124 129anti-parallel
Strand 4
D
134 140anti-parallel
Strand 5
D
143 150anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
154 160first strand
Strand 2
D
163 168anti-parallel
Strand 3
D
176 181anti-parallel
Strand 4
D
188 190anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
196 202first strand
Strand 2
D
208 213anti-parallel
Strand 3
D
219 223anti-parallel
Strand 4
D
230 232anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
247 253first strand
Strand 2
D
259 265anti-parallel
Strand 3
D
268 273anti-parallel
Strand 4
D
276 278anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
284 291first strand
Strand 2
D
294 301anti-parallel
Strand 3
D
304 311anti-parallel
Strand 4
D
316 318anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il