Analysis of interatomic Contacts of Structural Units in PDB entry:
3O6D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3O6D entry

There is 1 chain in PDB entry 3O6D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN -1ARG 257
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 3O6D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 18Right-handed alpha
Helix 2
2
A
23 35Right-handed alpha
Helix 3
3
A
50 61Right-handed alpha
Helix 4
4
A
72 83Right-handed alpha
Helix 5
5
A
93 97Right-handed 310
Helix 6
6
A
109 120Right-handed alpha
Helix 7
7
A
131 141Right-handed alpha
Helix 8
8
A
150 162Right-handed alpha
Helix 9
9
A
163 167Right-handed 310
Helix 10
10
A
171 175Right-handed 310
Helix 11
11
A
177 202Right-handed alpha
Helix 12
12
A
217 222Right-handed alpha
Helix 13
13
A
232 243Right-handed alpha
Helix 14
14
A
243 255Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3O6D.

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 6first strand
Strand 2
A
37 41parallel
Strand 3
A
65 69parallel
Strand 4
A
86 89parallel
Strand 5
A
123 128parallel
Strand 6
A
145 149parallel
Strand 7
A
205 209parallel
Strand 8
A
228 231parallel
Strand 9
A
2 6parallel
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