Analysis of interatomic Contacts of Structural Units in PDB entry:
3O6N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3O6N entry

There is 1 chain in PDB entry 3O6N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 140SER 523
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 3O6N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
174 178Right-handed 310
Helix 2
2
A
195 201Right-handed alpha
Helix 3
3
A
314 318Right-handed 310
Helix 4
4
A
374 380Right-handed 310
Helix 5
5
A
399 402Right-handed 310
Helix 6
6
A
443 445Right-handed 310
Helix 7
7
A
446 451Right-handed alpha
Helix 8
8
A
486 493Right-handed alpha
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There are 7 sheets in PDB entry 3O6N. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 143first strand
Strand 2
A
169 170parallel
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There are 15 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 157first strand
Strand 2
A
182 186parallel
Strand 3
A
206 208parallel
Strand 4
A
230 232parallel
Strand 5
A
254 256parallel
Strand 6
A
278 280parallel
Strand 7
A
302 304parallel
Strand 8
A
323 325parallel
Strand 9
A
342 344parallel
Strand 10
A
363 365parallel
Strand 11
A
385 387parallel
Strand 12
A
409 411parallel
Strand 13
A
432 434parallel
Strand 14
A
455 457parallel
Strand 15
A
476 478parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 161first strand
Strand 2
A
189 190parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 193first strand
Strand 2
A
216 217parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
333 335first strand
Strand 2
A
352 354parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
395 397first strand
Strand 2
A
419 421parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
484 485first strand
Strand 2
A
518 521parallel
Strand 3
A
513 515anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il