Analysis of interatomic Contacts of Structural Units in PDB entry:
3O6P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3O6P entry

There is 1 chain in PDB entry 3O6P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 300SER 526
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 11 helices in PDB entry 3O6P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
315 318Right-handed 310
Helix 2
2
A
319 329Right-handed alpha
Helix 3
3
A
331 338Right-handed alpha
Helix 4
4
A
364 370Right-handed alpha
Helix 5
5
A
376 392Right-handed alpha
Helix 6
6
A
405 423Right-handed alpha
Helix 7
7
A
434 445Right-handed alpha
Helix 8
8
A
461 466Right-handed alpha
Helix 9
9
A
467 469Right-handed 310
Helix 10
10
A
481 493Right-handed alpha
Helix 11
11
A
498 516Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 3O6P.

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
426 433first strand
Strand 2
A
396 403parallel
Strand 3
A
449 455parallel
Strand 4
A
302 308anti-parallel
Strand 5
A
520 525anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il