Analysis of interatomic Contacts of Structural Units in PDB entry:
3O7B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3O7B entry

There is 1 chain in PDB entry 3O7B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 216
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 12 helices in PDB entry 3O7B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 20Right-handed 310
Helix 2
2
A
22 33Right-handed alpha
Helix 3
3
A
35 39Right-handed 310
Helix 4
4
A
42 47Right-handed alpha
Helix 5
5
A
48 50Right-handed 310
Helix 6
6
A
55 59Right-handed 310
Helix 7
7
A
62 74Right-handed alpha
Helix 8
8
A
103 118Right-handed alpha
Helix 9
9
A
134 139Right-handed alpha
Helix 10
10
A
155 160Right-handed alpha
Helix 11
11
A
177 185Right-handed alpha
Helix 12
12
A
198 215Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 3O7B.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 122first strand
Strand 2
A
125 131anti-parallel
Strand 3
A
91 94anti-parallel
Strand 4
A
80 86anti-parallel
Strand 5
A
3 10parallel
Strand 6
A
164 169parallel
Strand 7
A
143 147parallel
Strand 8
A
187 190parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il