Analysis of interatomic Contacts of Structural Units in PDB entry:
3O80


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3O80 entry

There is 1 chain in PDB entry 3O80 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 17GLU 485
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 3O80. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 35Right-handed alpha
Helix 2
2
A
37 58Right-handed alpha
Helix 3
3
A
115 120Right-handed alpha
Helix 4
4
A
122 142Right-handed alpha
Helix 5
5
A
186 198Right-handed alpha
Helix 6
6
A
209 222Right-handed alpha
Helix 7
7
A
244 250Right-handed 310
Helix 8
8
A
268 272Right-handed 310
Helix 9
9
A
282 292Right-handed alpha
Helix 10
10
A
298 303Right-handed alpha
Helix 11
11
A
305 307Right-handed 310
Helix 12
12
A
308 323Right-handed alpha
Helix 13
13
A
343 352Right-handed alpha
Helix 14
14
A
357 369Right-handed alpha
Helix 15
15
A
373 407Right-handed alpha
Helix 16
16
A
417 423Right-handed alpha
Helix 17
17
A
425 439Right-handed alpha
Helix 18
18
A
444 448Right-handed 310
Helix 19
19
A
460 476Right-handed alpha
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There are 3 sheets in PDB entry 3O80. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 67first strand
Strand 2
A
262 266anti-parallel
Strand 3
A
235 242anti-parallel
Strand 4
A
225 231anti-parallel
Strand 5
A
411 416parallel
Strand 6
A
450 454parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 113first strand
Strand 2
A
91 100anti-parallel
Strand 3
A
79 87anti-parallel
Strand 4
A
150 156parallel
Strand 5
A
202 208parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 161first strand
Strand 2
A
169 170anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il