Analysis of interatomic Contacts of Structural Units in PDB entry:
3O8J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3O8J entry

There are 4 chains in PDB entry 3O8J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 26CYS 389
B
 PRO 26CYS 389
C
 PRO 26ARG 388
D
 GLY 28VAL 241
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are181 helices in PDB entry 3O8J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
49 56Right-handed alpha
Helix 2
2
A
57 67Right-handed alpha
Helix 3
3
A
72 85Right-handed alpha
Helix 4
4
A
90 99Right-handed alpha
Helix 5
5
A
105 121Right-handed alpha
Helix 6
6
A
128 157Right-handed alpha
Helix 7
7
A
168 179Right-handed alpha
Helix 8
8
A
183 197Right-handed alpha
Helix 9
9
A
203 214Right-handed alpha
Helix 10
10
A
218 231Right-handed alpha
Helix 11
11
A
237 247Right-handed alpha
Helix 12
12
A
251 265Right-handed alpha
Helix 13
13
A
281 299Right-handed alpha
Helix 14
14
A
301 319Right-handed alpha
Helix 15
15
A
326 335Right-handed alpha
Helix 16
16
A
338 340Right-handed 310
Helix 17
17
A
341 364Right-handed alpha
Helix 18
18
A
384 388Right-handed 310
Helix 19
19
B
49 56Right-handed alpha
Helix 20
20
B
57 67Right-handed alpha
Helix 21
21
B
72 85Right-handed alpha
Helix 22
22
B
90 99Right-handed alpha
Helix 23
23
B
105 121Right-handed alpha
Helix 24
24
B
128 157Right-handed alpha
Helix 25
25
B
168 179Right-handed alpha
Helix 26
26
B
183 198Right-handed alpha
Helix 27
27
B
203 215Right-handed alpha
Helix 28
28
B
218 232Right-handed alpha
Helix 29
29
B
237 249Right-handed alpha
Helix 30
30
B
251 264Right-handed alpha
Helix 31
31
B
281 299Right-handed alpha
Helix 32
32
B
301 319Right-handed alpha
Helix 33
33
B
327 335Right-handed alpha
Helix 34
34
B
338 340Right-handed 310
Helix 35
35
B
341 364Right-handed alpha
Helix 36
36
B
384 389Right-handed 310
Helix 37
37
C
49 56Right-handed alpha
Helix 38
38
C
57 67Right-handed alpha
Helix 39
39
C
72 85Right-handed alpha
Helix 40
40
C
90 99Right-handed alpha
Helix 41
41
C
105 121Right-handed alpha
Helix 42
42
C
128 157Right-handed alpha
Helix 43
43
C
168 179Right-handed alpha
Helix 44
44
C
183 197Right-handed alpha
Helix 45
45
C
203 214Right-handed alpha
Helix 46
46
C
218 232Right-handed alpha
Helix 47
47
C
237 248Right-handed alpha
Helix 48
48
C
251 265Right-handed alpha
Helix 49
49
C
281 298Right-handed alpha
Helix 50
50
C
303 318Right-handed alpha
Helix 51
51
C
324 335Right-handed alpha
Helix 52
52
C
338 340Right-handed 310
Helix 53
53
C
341 364Right-handed alpha
Helix 54
54
C
384 388Right-handed 310
Helix 55
55
D
49 56Right-handed alpha
Helix 56
56
D
57 68Right-handed alpha
Helix 57
57
D
72 85Right-handed alpha
Helix 58
58
D
90 99Right-handed alpha
Helix 59
59
D
105 121Right-handed alpha
Helix 60
60
D
128 157Right-handed alpha
Helix 61
61
D
168 179Right-handed alpha
Helix 62
62
D
183 198Right-handed alpha
Helix 63
63
D
203 215Right-handed alpha
Helix 64
64
D
218 232Right-handed alpha
Helix 65
65
D
238 247Right-handed alpha
Helix 66
66
D
251 265Right-handed alpha
Helix 67
67
D
281 298Right-handed alpha
Helix 68
68
D
301 319Right-handed alpha
Helix 69
69
D
324 335Right-handed alpha
Helix 70
70
D
338 340Right-handed 310
Helix 71
71
D
341 364Right-handed alpha
Helix 72
72
D
384 388Right-handed 310
Helix 73
73
E
49 56Right-handed alpha
Helix 74
74
E
57 67Right-handed alpha
Helix 75
75
E
72 85Right-handed alpha
Helix 76
76
E
90 99Right-handed alpha
Helix 77
77
E
105 121Right-handed alpha
Helix 78
78
E
128 157Right-handed alpha
Helix 79
79
E
168 179Right-handed alpha
Helix 80
80
E
183 198Right-handed alpha
Helix 81
81
E
203 215Right-handed alpha
Helix 82
82
E
218 231Right-handed alpha
Helix 83
83
E
237 247Right-handed alpha
Helix 84
84
E
251 265Right-handed alpha
Helix 85
85
E
281 299Right-handed alpha
Helix 86
86
E
301 319Right-handed alpha
Helix 87
87
E
323 335Right-handed alpha
Helix 88
88
E
338 340Right-handed 310
Helix 89
89
E
341 364Right-handed alpha
Helix 90
90
F
49 56Right-handed alpha
Helix 91
91
F
57 67Right-handed alpha
Helix 92
92
F
72 85Right-handed alpha
Helix 93
93
F
90 99Right-handed alpha
Helix 94
94
F
105 121Right-handed alpha
Helix 95
95
F
128 157Right-handed alpha
Helix 96
96
F
168 179Right-handed alpha
Helix 97
97
F
183 197Right-handed alpha
Helix 98
98
F
203 214Right-handed alpha
Helix 99
99
F
218 232Right-handed alpha
Helix 100
100
F
232 237Right-handed alpha
Helix 101
101
F
237 248Right-handed alpha
Helix 102
102
F
251 265Right-handed alpha
Helix 103
103
F
281 299Right-handed alpha
Helix 104
104
F
301 319Right-handed alpha
Helix 105
105
F
327 335Right-handed alpha
Helix 106
106
F
338 340Right-handed 310
Helix 107
107
F
341 364Right-handed alpha
Helix 108
108
F
384 388Right-handed 310
Helix 109
109
G
49 56Right-handed alpha
Helix 110
110
G
57 67Right-handed alpha
Helix 111
111
G
72 85Right-handed alpha
Helix 112
112
G
90 99Right-handed alpha
Helix 113
113
G
105 121Right-handed alpha
Helix 114
114
G
128 157Right-handed alpha
Helix 115
115
G
168 179Right-handed alpha
Helix 116
116
G
183 197Right-handed alpha
Helix 117
117
G
203 215Right-handed alpha
Helix 118
118
G
218 232Right-handed alpha
Helix 119
119
G
237 247Right-handed alpha
Helix 120
120
G
251 265Right-handed alpha
Helix 121
121
G
281 298Right-handed alpha
Helix 122
122
G
301 319Right-handed alpha
Helix 123
123
G
326 335Right-handed alpha
Helix 124
124
G
338 340Right-handed 310
Helix 125
125
G
341 365Right-handed alpha
Helix 126
126
G
384 388Right-handed 310
Helix 127
127
H
49 56Right-handed alpha
Helix 128
128
H
57 68Right-handed alpha
Helix 129
129
H
72 85Right-handed alpha
Helix 130
130
H
90 99Right-handed alpha
Helix 131
131
H
105 121Right-handed alpha
Helix 132
132
H
128 157Right-handed alpha
Helix 133
133
H
168 179Right-handed alpha
Helix 134
134
H
183 198Right-handed alpha
Helix 135
135
H
203 215Right-handed alpha
Helix 136
136
H
218 231Right-handed alpha
Helix 137
137
H
237 248Right-handed alpha
Helix 138
138
H
251 265Right-handed alpha
Helix 139
139
H
281 299Right-handed alpha
Helix 140
140
H
301 319Right-handed alpha
Helix 141
141
H
323 335Right-handed alpha
Helix 142
142
H
338 340Right-handed 310
Helix 143
143
H
341 364Right-handed alpha
Helix 144
144
H
384 388Right-handed 310
Helix 145
145
I
49 56Right-handed alpha
Helix 146
146
I
57 68Right-handed alpha
Helix 147
147
I
72 85Right-handed alpha
Helix 148
148
I
90 100Right-handed alpha
Helix 149
149
I
105 121Right-handed alpha
Helix 150
150
I
128 157Right-handed alpha
Helix 151
151
I
168 179Right-handed alpha
Helix 152
152
I
183 198Right-handed alpha
Helix 153
153
I
203 214Right-handed alpha
Helix 154
154
I
218 232Right-handed alpha
Helix 155
155
I
238 248Right-handed alpha
Helix 156
156
I
251 265Right-handed alpha
Helix 157
157
I
281 299Right-handed alpha
Helix 158
158
I
301 319Right-handed alpha
Helix 159
159
I
327 335Right-handed alpha
Helix 160
160
I
338 340Right-handed 310
Helix 161
161
I
341 364Right-handed alpha
Helix 162
162
I
384 388Right-handed 310
Helix 163
163
J
49 56Right-handed alpha
Helix 164
164
J
57 67Right-handed alpha
Helix 165
165
J
72 85Right-handed alpha
Helix 166
166
J
90 99Right-handed alpha
Helix 167
167
J
105 121Right-handed alpha
Helix 168
168
J
128 157Right-handed alpha
Helix 169
169
J
168 179Right-handed alpha
Helix 170
170
J
183 197Right-handed alpha
Helix 171
171
J
203 214Right-handed alpha
Helix 172
172
J
218 232Right-handed alpha
Helix 173
173
J
232 237Right-handed alpha
Helix 174
174
J
237 247Right-handed alpha
Helix 175
175
J
251 265Right-handed alpha
Helix 176
176
J
281 298Right-handed alpha
Helix 177
177
J
301 318Right-handed alpha
Helix 178
178
J
326 335Right-handed alpha
Helix 179
179
J
338 340Right-handed 310
Helix 180
180
J
341 362Right-handed alpha
Helix 181
181
J
384 388Right-handed 310
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There are 20 sheets in PDB entry 3O8J. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 30first strand
Strand 2
B
373 374parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 35first strand
Strand 2
A
42 44anti-parallel
Strand 3
A
47 48anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 374first strand
Strand 2
B
28 30parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 35first strand
Strand 2
B
42 44anti-parallel
Strand 3
B
47 48anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
29 30first strand
Strand 2
D
373 374parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
33 35first strand
Strand 2
C
42 44anti-parallel
Strand 3
C
47 48anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
373 374first strand
Strand 2
D
29 30parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
33 35first strand
Strand 2
D
42 44anti-parallel
Strand 3
D
47 48anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
29 30first strand
Strand 2
F
373 374parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
33 35first strand
Strand 2
E
42 44anti-parallel
Strand 3
E
47 48anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
373 374first strand
Strand 2
F
29 30parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
33 35first strand
Strand 2
F
42 44anti-parallel
Strand 3
F
47 48anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
28 30first strand
Strand 2
H
372 374parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
33 35first strand
Strand 2
G
42 44anti-parallel
Strand 3
G
47 48anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
373 374first strand
Strand 2
H
29 30parallel
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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
33 35first strand
Strand 2
H
42 44anti-parallel
Strand 3
H
47 48anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
29 30first strand
Strand 2
J
373 374parallel
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There are 3 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
33 35first strand
Strand 2
I
42 44anti-parallel
Strand 3
I
47 48anti-parallel
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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
372 374first strand
Strand 2
J
28 30parallel
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There are 3 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
33 35first strand
Strand 2
J
42 44anti-parallel
Strand 3
J
47 48anti-parallel
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