Analysis of interatomic Contacts of Structural Units in PDB entry:
3OBV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OBV entry

There are 4 chains in PDB entry 3OBV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 131ILE 452
E
 LYS 754PHE 1195
B
 SER 132ASP 457
F
 LYS 754LYS 952
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are151 helices in PDB entry 3OBV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
134 144Right-handed alpha
Helix 2
2
A
148 166Right-handed alpha
Helix 3
3
A
167 195Right-handed alpha
Helix 4
4
A
201 216Right-handed alpha
Helix 5
5
A
218 227Right-handed alpha
Helix 6
6
A
230 238Right-handed alpha
Helix 7
7
A
243 260Right-handed alpha
Helix 8
8
A
265 282Right-handed alpha
Helix 9
9
A
286 292Right-handed alpha
Helix 10
10
A
298 314Right-handed alpha
Helix 11
11
A
318 332Right-handed alpha
Helix 12
12
A
333 342Right-handed alpha
Helix 13
13
A
346 378Right-handed alpha
Helix 14
14
A
380 393Right-handed alpha
Helix 15
15
A
396 410Right-handed alpha
Helix 16
16
A
416 434Right-handed alpha
Helix 17
17
A
435 439Right-handed 310
Helix 18
18
E
780 784Right-handed 310
Helix 19
19
E
785 790Right-handed 310
Helix 20
20
E
793 802Right-handed alpha
Helix 21
21
E
836 851Right-handed alpha
Helix 22
22
E
853 864Right-handed alpha
Helix 23
23
E
870 881Right-handed alpha
Helix 24
24
E
883 892Right-handed alpha
Helix 25
25
E
896 900Right-handed 310
Helix 26
26
E
901 911Right-handed alpha
Helix 27
27
E
915 934Right-handed alpha
Helix 28
28
E
936 952Right-handed alpha
Helix 29
29
E
953 971Right-handed alpha
Helix 30
30
E
983 985Right-handed 310
Helix 31
31
E
986 991Right-handed alpha
Helix 32
32
E
1001 1014Right-handed alpha
Helix 33
33
E
1015 1018Right-handed 310
Helix 34
34
E
1019 1024Right-handed alpha
Helix 35
35
E
1026 1031Right-handed alpha
Helix 36
36
E
1034 1058Right-handed alpha
Helix 37
37
E
1068 1105Right-handed alpha
Helix 38
38
E
1113 1167Right-handed alpha
Helix 39
39
E
1180 1192Right-handed alpha
Helix 40
40
B
133 144Right-handed alpha
Helix 41
41
B
148 166Right-handed alpha
Helix 42
42
B
167 192Right-handed alpha
Helix 43
43
B
201 216Right-handed alpha
Helix 44
44
B
218 228Right-handed alpha
Helix 45
45
B
230 238Right-handed alpha
Helix 46
46
B
243 260Right-handed alpha
Helix 47
47
B
265 282Right-handed alpha
Helix 48
48
B
286 294Right-handed alpha
Helix 49
49
B
298 314Right-handed alpha
Helix 50
50
B
318 332Right-handed alpha
Helix 51
51
B
333 342Right-handed alpha
Helix 52
52
B
346 378Right-handed alpha
Helix 53
53
B
380 393Right-handed alpha
Helix 54
54
B
397 409Right-handed alpha
Helix 55
55
B
416 434Right-handed alpha
Helix 56
56
B
435 439Right-handed 310
Helix 57
57
F
771 776Right-handed alpha
Helix 58
58
F
785 790Right-handed 310
Helix 59
59
F
791 802Right-handed alpha
Helix 60
60
F
836 851Right-handed alpha
Helix 61
61
F
853 864Right-handed alpha
Helix 62
62
F
870 881Right-handed alpha
Helix 63
63
F
883 889Right-handed alpha
Helix 64
64
F
901 913Right-handed alpha
Helix 65
65
F
915 934Right-handed alpha
Helix 66
66
F
936 953Right-handed alpha
Helix 67
67
F
953 971Right-handed alpha
Helix 68
68
F
984 993Right-handed 310
Helix 69
69
F
1001 1014Right-handed alpha
Helix 70
70
F
1015 1023Right-handed 310
Helix 71
71
F
1026 1033Right-handed alpha
Helix 72
72
F
1034 1057Right-handed alpha
Helix 73
73
F
1068 1105Right-handed alpha
Helix 74
74
F
1108 1112Right-handed 310
Helix 75
75
F
1113 1167Right-handed alpha
Helix 76
76
F
1180 1192Right-handed alpha
Helix 77
77
C
132 144Right-handed alpha
Helix 78
78
C
148 166Right-handed alpha
Helix 79
79
C
167 194Right-handed alpha
Helix 80
80
C
201 216Right-handed alpha
Helix 81
81
C
218 227Right-handed alpha
Helix 82
82
C
230 238Right-handed alpha
Helix 83
83
C
243 260Right-handed alpha
Helix 84
84
C
265 282Right-handed alpha
Helix 85
85
C
286 292Right-handed alpha
Helix 86
86
C
298 314Right-handed alpha
Helix 87
87
C
318 332Right-handed alpha
Helix 88
88
C
333 342Right-handed alpha
Helix 89
89
C
346 378Right-handed alpha
Helix 90
90
C
380 393Right-handed alpha
Helix 91
91
C
396 410Right-handed alpha
Helix 92
92
C
416 434Right-handed alpha
Helix 93
93
C
435 439Right-handed 310
Helix 94
94
G
780 784Right-handed 310
Helix 95
95
G
785 790Right-handed 310
Helix 96
96
G
793 802Right-handed alpha
Helix 97
97
G
836 851Right-handed alpha
Helix 98
98
G
853 864Right-handed alpha
Helix 99
99
G
870 881Right-handed alpha
Helix 100
100
G
883 892Right-handed alpha
Helix 101
101
G
896 900Right-handed 310
Helix 102
102
G
901 911Right-handed alpha
Helix 103
103
G
915 934Right-handed alpha
Helix 104
104
G
936 952Right-handed alpha
Helix 105
105
G
953 971Right-handed alpha
Helix 106
106
G
984 993Right-handed 310
Helix 107
107
G
1001 1014Right-handed alpha
Helix 108
108
G
1015 1018Right-handed 310
Helix 109
109
G
1019 1024Right-handed alpha
Helix 110
110
G
1026 1031Right-handed alpha
Helix 111
111
G
1034 1058Right-handed alpha
Helix 112
112
G
1068 1105Right-handed alpha
Helix 113
113
G
1113 1167Right-handed alpha
Helix 114
114
G
1180 1192Right-handed alpha
Helix 115
115
D
134 144Right-handed alpha
Helix 116
116
D
148 166Right-handed alpha
Helix 117
117
D
167 195Right-handed alpha
Helix 118
118
D
200 216Right-handed alpha
Helix 119
119
D
218 228Right-handed alpha
Helix 120
120
D
230 238Right-handed alpha
Helix 121
121
D
243 260Right-handed alpha
Helix 122
122
D
265 282Right-handed alpha
Helix 123
123
D
286 294Right-handed alpha
Helix 124
124
D
298 314Right-handed alpha
Helix 125
125
D
318 332Right-handed alpha
Helix 126
126
D
333 342Right-handed alpha
Helix 127
127
D
346 378Right-handed alpha
Helix 128
128
D
380 393Right-handed alpha
Helix 129
129
D
397 409Right-handed alpha
Helix 130
130
D
416 434Right-handed alpha
Helix 131
131
D
435 439Right-handed 310
Helix 132
132
H
771 776Right-handed alpha
Helix 133
133
H
785 790Right-handed 310
Helix 134
134
H
791 802Right-handed alpha
Helix 135
135
H
836 851Right-handed alpha
Helix 136
136
H
853 864Right-handed alpha
Helix 137
137
H
870 881Right-handed alpha
Helix 138
138
H
883 889Right-handed alpha
Helix 139
139
H
901 913Right-handed alpha
Helix 140
140
H
915 934Right-handed alpha
Helix 141
141
H
936 953Right-handed alpha
Helix 142
142
H
953 971Right-handed alpha
Helix 143
143
H
984 993Right-handed 310
Helix 144
144
H
1001 1014Right-handed alpha
Helix 145
145
H
1015 1023Right-handed 310
Helix 146
146
H
1026 1031Right-handed alpha
Helix 147
147
H
1034 1057Right-handed alpha
Helix 148
148
H
1068 1105Right-handed alpha
Helix 149
149
H
1108 1112Right-handed 310
Helix 150
150
H
1113 1167Right-handed alpha
Helix 151
151
H
1180 1192Right-handed alpha
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There are 5 sheets in PDB entry 3OBV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
447 451first strand
Strand 2
B
447 451anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
769 770first strand
Strand 2
F
981 982anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
447 451first strand
Strand 2
D
447 451anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
769 770first strand
Strand 2
H
981 982anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
981 982first strand
Strand 2
H
769 770anti-parallel
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