Analysis of interatomic Contacts of Structural Units in PDB entry:
3OE8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OE8 entry

There are 3 chains in PDB entry 3OE8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 27LEU 305
B
 PRO 27PHE 304
C
 PRO 27ILE 270
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 71 helices in PDB entry 3OE8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
36 66Right-handed alpha
Helix 2
2
A
71 89Right-handed alpha
Helix 3
3
A
90 100Right-handed alpha
Helix 4
4
A
105 140Right-handed alpha
Helix 5
5
A
144 154Right-handed alpha
Helix 6
6
A
154 160Right-handed alpha
Helix 7
7
A
160 167Right-handed alpha
Helix 8
8
A
168 174Right-handed alpha
Helix 9
9
A
192 208Right-handed alpha
Helix 10
10
A
208 226Right-handed alpha
Helix 11
11
A
1003 1011Right-handed alpha
Helix 12
12
A
1038 1051Right-handed alpha
Helix 13
13
A
1059 1079Right-handed alpha
Helix 14
14
A
1084 1090Right-handed alpha
Helix 15
15
A
1092 1106Right-handed alpha
Helix 16
16
A
1107 1112Right-handed alpha
Helix 17
17
A
1115 1123Right-handed alpha
Helix 18
18
A
1125 1135Right-handed alpha
Helix 19
19
A
1136 1142Right-handed alpha
Helix 20
20
A
1142 1156Right-handed alpha
Helix 21
21
A
233 268Right-handed alpha
Helix 22
22
A
273 292Right-handed alpha
Helix 23
23
A
293 305Right-handed alpha
Helix 24
24
B
36 63Right-handed alpha
Helix 25
25
B
71 89Right-handed alpha
Helix 26
26
B
90 100Right-handed alpha
Helix 27
27
B
104 139Right-handed alpha
Helix 28
28
B
147 154Right-handed alpha
Helix 29
29
B
154 160Right-handed alpha
Helix 30
30
B
160 167Right-handed alpha
Helix 31
31
B
168 174Right-handed alpha
Helix 32
32
B
192 208Right-handed alpha
Helix 33
33
B
208 226Right-handed alpha
Helix 34
34
B
1002 1011Right-handed alpha
Helix 35
35
B
1039 1051Right-handed alpha
Helix 36
36
B
1059 1081Right-handed alpha
Helix 37
37
B
1084 1091Right-handed alpha
Helix 38
38
B
1092 1107Right-handed alpha
Helix 39
39
B
1107 1113Right-handed alpha
Helix 40
40
B
1114 1123Right-handed alpha
Helix 41
41
B
1125 1136Right-handed alpha
Helix 42
42
B
1136 1142Right-handed alpha
Helix 43
43
B
1142 1156Right-handed alpha
Helix 44
44
B
232 263Right-handed alpha
Helix 45
45
B
273 292Right-handed alpha
Helix 46
46
B
293 295Right-handed 310
Helix 47
47
B
296 303Right-handed alpha
Helix 48
48
C
36 64Right-handed alpha
Helix 49
49
C
71 89Right-handed alpha
Helix 50
50
C
90 100Right-handed alpha
Helix 51
51
C
104 139Right-handed alpha
Helix 52
52
C
146 154Right-handed alpha
Helix 53
53
C
154 160Right-handed alpha
Helix 54
54
C
160 167Right-handed alpha
Helix 55
55
C
168 174Right-handed alpha
Helix 56
56
C
192 208Right-handed alpha
Helix 57
57
C
208 225Right-handed alpha
Helix 58
58
C
1002 1011Right-handed alpha
Helix 59
59
C
1041 1051Right-handed alpha
Helix 60
60
C
1059 1081Right-handed alpha
Helix 61
61
C
1083 1091Right-handed alpha
Helix 62
62
C
1092 1106Right-handed alpha
Helix 63
63
C
1107 1112Right-handed alpha
Helix 64
64
C
1114 1123Right-handed alpha
Helix 65
65
C
1125 1135Right-handed alpha
Helix 66
66
C
1136 1142Right-handed alpha
Helix 67
67
C
1142 1156Right-handed alpha
Helix 68
68
C
1157 1161Right-handed 310
Helix 69
69
C
232 267Right-handed alpha
Helix 70
70
C
273 292Right-handed alpha
Helix 71
71
C
293 305Right-handed alpha
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There are 6 sheets in PDB entry 3OE8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 180first strand
Strand 2
A
183 188anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1014 1019first strand
Strand 2
A
1025 1028anti-parallel
Strand 3
A
1031 1034anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
175 179first strand
Strand 2
B
184 188anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1014 1019first strand
Strand 2
B
1025 1028anti-parallel
Strand 3
B
1031 1032anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
175 178first strand
Strand 2
C
185 188anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1018 1019first strand
Strand 2
C
1025 1027anti-parallel
Strand 3
C
1031 1032anti-parallel
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