Analysis of interatomic Contacts of Structural Units in PDB entry:
3OE9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OE9 entry

There are 2 chains in PDB entry 3OE9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 28ALA 303
B
 ASN 35ALA 303
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 3OE9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
40 65Right-handed alpha
Helix 2
2
A
71 89Right-handed alpha
Helix 3
3
A
90 100Right-handed alpha
Helix 4
4
A
105 139Right-handed alpha
Helix 5
5
A
147 154Right-handed alpha
Helix 6
6
A
154 160Right-handed alpha
Helix 7
7
A
160 167Right-handed alpha
Helix 8
8
A
169 174Right-handed alpha
Helix 9
9
A
193 198Right-handed alpha
Helix 10
10
A
198 208Right-handed alpha
Helix 11
11
A
208 227Right-handed alpha
Helix 12
12
A
228 1011Right-handed alpha
Helix 13
13
A
1038 1051Right-handed alpha
Helix 14
14
A
1059 1079Right-handed alpha
Helix 15
15
A
1083 1091Right-handed alpha
Helix 16
16
A
1092 1104Right-handed alpha
Helix 17
17
A
1107 1113Right-handed alpha
Helix 18
18
A
1114 1123Right-handed alpha
Helix 19
19
A
1125 1135Right-handed alpha
Helix 20
20
A
1142 1156Right-handed alpha
Helix 21
21
A
238 267Right-handed alpha
Helix 22
22
A
274 292Right-handed alpha
Helix 23
23
A
293 302Right-handed 310
Helix 24
24
B
36 63Right-handed alpha
Helix 25
25
B
74 100Right-handed alpha
Helix 26
26
B
104 139Right-handed alpha
Helix 27
27
B
147 152Right-handed alpha
Helix 28
28
B
154 160Right-handed alpha
Helix 29
29
B
160 166Right-handed alpha
Helix 30
30
B
168 174Right-handed alpha
Helix 31
31
B
192 208Right-handed alpha
Helix 32
32
B
208 1011Right-handed alpha
Helix 33
33
B
1038 1050Right-handed alpha
Helix 34
34
B
1059 1079Right-handed alpha
Helix 35
35
B
1084 1091Right-handed alpha
Helix 36
36
B
1092 1106Right-handed alpha
Helix 37
37
B
1107 1112Right-handed alpha
Helix 38
38
B
1114 1122Right-handed alpha
Helix 39
39
B
1125 1134Right-handed alpha
Helix 40
40
B
1136 1142Right-handed alpha
Helix 41
41
B
1142 1156Right-handed alpha
Helix 42
42
B
238 267Right-handed alpha
Helix 43
43
B
273 291Right-handed alpha
Helix 44
44
B
292 296Right-handed 310
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There are 4 sheets in PDB entry 3OE9. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 178first strand
Strand 2
A
185 188anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1013 1018first strand
Strand 2
A
1025 1029anti-parallel
Strand 3
A
1031 1034anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
175 178first strand
Strand 2
B
185 188anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1013 1014first strand
Strand 2
B
1025 1029anti-parallel
Strand 3
B
1031 1034anti-parallel
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