Analysis of interatomic Contacts of Structural Units in PDB entry:
3OF1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OF1 entry

There is 1 chain in PDB entry 3OF1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 171HIS 416
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 3OF1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
172 181Right-handed alpha
Helix 2
2
A
189 198Right-handed alpha
Helix 3
3
A
248 255Right-handed alpha
Helix 4
4
A
275 281Right-handed alpha
Helix 5
5
A
287 293Right-handed alpha
Helix 6
6
A
293 300Right-handed alpha
Helix 7
7
A
301 304Right-handed 310
Helix 8
8
A
307 317Right-handed alpha
Helix 9
9
A
367 374Right-handed alpha
Helix 10
10
A
394 401Right-handed alpha
Helix 11
11
A
404 411Right-handed alpha
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There are 4 sheets in PDB entry 3OF1. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 205first strand
Strand 2
A
268 274anti-parallel
Strand 3
A
220 226anti-parallel
Strand 4
A
246 247anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
210 212first strand
Strand 2
A
261 264anti-parallel
Strand 3
A
229 232anti-parallel
Strand 4
A
239 241anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
319 323first strand
Strand 2
A
387 393anti-parallel
Strand 3
A
338 344anti-parallel
Strand 4
A
365 366anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
328 330first strand
Strand 2
A
380 383anti-parallel
Strand 3
A
346 351anti-parallel
Strand 4
A
355 361anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il