Analysis of interatomic Contacts of Structural Units in PDB entry:
3OH8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OH8 entry

There is 1 chain in PDB entry 3OH8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2HIS 513
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 3OH8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 22Right-handed alpha
Helix 2
2
A
24 30Right-handed alpha
Helix 3
3
A
66 69Right-handed 310
Helix 4
4
A
84 88Right-handed 310
Helix 5
5
A
114 117Right-handed 310
Helix 6
6
A
118 140Right-handed alpha
Helix 7
7
A
157 170Right-handed alpha
Helix 8
8
A
218 220Right-handed 310
Helix 9
9
A
221 229Right-handed alpha
Helix 10
10
A
229 243Right-handed alpha
Helix 11
11
A
256 259Right-handed 310
Helix 12
12
A
276 288Right-handed alpha
Helix 13
13
A
289 295Right-handed alpha
Helix 14
14
A
313 321Right-handed alpha
Helix 15
15
A
342 355Right-handed alpha
Helix 16
16
A
372 379Right-handed alpha
Helix 17
17
A
404 411Right-handed 310
Helix 18
18
A
417 423Right-handed alpha
Helix 19
19
A
431 441Right-handed alpha
Helix 20
20
A
447 455Right-handed alpha
Helix 21
21
A
487 512Right-handed alpha
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There are 5 sheets in PDB entry 3OH8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 9first strand
Strand 2
A
102 110anti-parallel
Strand 3
A
91 99anti-parallel
Strand 4
A
74 78anti-parallel
Strand 5
A
59 64anti-parallel
Strand 6
A
49 53anti-parallel
Strand 7
A
37 38anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 188first strand
Strand 2
A
173 178parallel
Strand 3
A
149 153parallel
Strand 4
A
204 207parallel
Strand 5
A
248 254parallel
Strand 6
A
298 304parallel
Strand 7
A
360 364parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 267first strand
Strand 2
A
412 415parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
306 308first strand
Strand 2
A
339 341parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
336 337first strand
Strand 2
A
370 371anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il