Analysis of interatomic Contacts of Structural Units in PDB entry:
3OHG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OHG entry

There is 1 chain in PDB entry 3OHG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0LYS 315
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 3OHG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
35 44Right-handed alpha
Helix 2
2
A
104 108Right-handed 310
Helix 3
3
A
110 121Right-handed alpha
Helix 4
4
A
177 182Right-handed alpha
Helix 5
5
A
183 185Right-handed 310
Helix 6
6
A
210 215Right-handed 310
Helix 7
7
A
250 262Right-handed alpha
Helix 8
8
A
271 275Right-handed 310
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There are 5 sheets in PDB entry 3OHG. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 59first strand
Strand 2
A
62 71anti-parallel
Strand 3
A
74 84anti-parallel
Strand 4
A
230 236anti-parallel
Strand 5
A
219 224anti-parallel
Strand 6
A
265 268anti-parallel
Strand 7
A
196 199anti-parallel
Strand 8
A
202 203anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 94first strand
Strand 2
A
307 313anti-parallel
Strand 3
A
125 130anti-parallel
Strand 4
A
277 279anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 135first strand
Strand 2
A
140 141anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 153first strand
Strand 2
A
145 147anti-parallel
Strand 3
A
187 193anti-parallel
Strand 4
A
162 167anti-parallel
Strand 5
A
172 176anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
281 282first strand
Strand 2
A
288 289anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il