Analysis of interatomic Contacts of Structural Units in PDB entry:
3OII


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OII entry

There are 2 chains in PDB entry 3OII (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 28LEU 252
B
 PRO 28LEU 252
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 3OII. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
73 80Right-handed alpha
Helix 2
2
A
83 87Right-handed 310
Helix 3
3
A
88 101Right-handed alpha
Helix 4
4
A
102 107Right-handed alpha
Helix 5
5
A
133 148Right-handed alpha
Helix 6
6
A
166 170Right-handed 310
Helix 7
7
A
188 195Right-handed alpha
Helix 8
8
A
233 249Right-handed alpha
Helix 9
9
B
73 80Right-handed alpha
Helix 10
10
B
83 87Right-handed 310
Helix 11
11
B
88 101Right-handed alpha
Helix 12
12
B
102 107Right-handed alpha
Helix 13
13
B
133 148Right-handed alpha
Helix 14
14
B
166 170Right-handed 310
Helix 15
15
B
188 195Right-handed alpha
Helix 16
16
B
233 249Right-handed alpha
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There are 3 sheets in PDB entry 3OII. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 152first strand
Strand 2
A
155 163anti-parallel
Strand 3
A
121 124anti-parallel
Strand 4
A
110 116anti-parallel
Strand 5
A
41 48parallel
Strand 6
A
201 207parallel
Strand 7
A
175 180parallel
Strand 8
A
223 225parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 53first strand
Strand 2
A
66 67anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
149 150first strand
Strand 2
B
160 163anti-parallel
Strand 3
B
121 124anti-parallel
Strand 4
B
110 116anti-parallel
Strand 5
B
41 48parallel
Strand 6
B
201 207parallel
Strand 7
B
175 180parallel
Strand 8
B
223 225parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il