Analysis of interatomic Contacts of Structural Units in PDB entry:
3OKI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OKI entry

There are 4 chains in PDB entry 3OKI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 247GLN 476
B
 ASP 745ASP 756
C
 MET 247GLN 476
D
 HIS 746LYS 755
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 3OKI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
250 265Right-handed alpha
Helix 2
2
A
269 280Right-handed alpha
Helix 3
3
A
283 308Right-handed alpha
Helix 4
4
A
311 315Right-handed 310
Helix 5
5
A
316 341Right-handed alpha
Helix 6
6
A
347 358Right-handed alpha
Helix 7
7
A
362 378Right-handed alpha
Helix 8
8
A
382 395Right-handed alpha
Helix 9
9
A
404 427Right-handed alpha
Helix 10
10
A
432 446Right-handed alpha
Helix 11
11
A
450 457Right-handed alpha
Helix 12
12
A
466 473Right-handed alpha
Helix 13
13
B
746 753Right-handed alpha
Helix 14
14
C
250 265Right-handed alpha
Helix 15
15
C
269 280Right-handed alpha
Helix 16
16
C
283 308Right-handed alpha
Helix 17
17
C
311 315Right-handed 310
Helix 18
18
C
316 342Right-handed alpha
Helix 19
19
C
347 358Right-handed alpha
Helix 20
20
C
362 379Right-handed alpha
Helix 21
21
C
382 395Right-handed alpha
Helix 22
22
C
404 427Right-handed alpha
Helix 23
23
C
432 456Right-handed alpha
Helix 24
24
C
466 474Right-handed alpha
Helix 25
25
D
746 754Right-handed alpha
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There are no sheets in PDB entry 3OKI
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il