Analysis of interatomic Contacts of Structural Units in PDB entry:
3OL8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OL8 entry

There are 9 chains in PDB entry 3OL8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1PHE 461
B
 C 597 A 613
C
 G 688 C 702
D
 G 805 A 807
E
 GLY 1PHE 461
F
 C 597 A 613
G
 G 688 C 702
H
 G 805 A 807
I
 GLY 1LYS 143
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are104 helices in PDB entry 3OL8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 13Right-handed 310
Helix 2
2
A
29 32Right-handed 310
Helix 3
3
A
53 59Right-handed alpha
Helix 4
4
A
60 62Right-handed 310
Helix 5
5
A
71 87Right-handed alpha
Helix 6
6
A
96 103Right-handed alpha
Helix 7
7
A
119 123Right-handed 310
Helix 8
8
A
126 131Right-handed alpha
Helix 9
9
A
138 149Right-handed alpha
Helix 10
10
A
164 170Right-handed alpha
Helix 11
11
A
180 200Right-handed alpha
Helix 12
12
A
213 218Right-handed alpha
Helix 13
13
A
220 225Right-handed alpha
Helix 14
14
A
237 241Right-handed 310
Helix 15
15
A
242 257Right-handed alpha
Helix 16
16
A
258 262Right-handed 310
Helix 17
17
A
263 269Right-handed alpha
Helix 18
18
A
292 313Right-handed alpha
Helix 19
19
A
317 321Right-handed 310
Helix 20
20
A
339 348Right-handed alpha
Helix 21
21
A
349 351Right-handed 310
Helix 22
22
A
393 402Right-handed alpha
Helix 23
23
A
406 408Right-handed 310
Helix 24
24
A
409 422Right-handed alpha
Helix 25
25
A
425 438Right-handed alpha
Helix 26
26
A
441 445Right-handed 310
Helix 27
27
A
449 460Right-handed alpha
Helix 28
28
E
10 13Right-handed 310
Helix 29
29
E
29 32Right-handed 310
Helix 30
30
E
53 59Right-handed alpha
Helix 31
31
E
60 62Right-handed 310
Helix 32
32
E
71 87Right-handed alpha
Helix 33
33
E
96 103Right-handed alpha
Helix 34
34
E
119 123Right-handed 310
Helix 35
35
E
126 131Right-handed alpha
Helix 36
36
E
138 149Right-handed alpha
Helix 37
37
E
164 170Right-handed alpha
Helix 38
38
E
180 200Right-handed alpha
Helix 39
39
E
213 218Right-handed alpha
Helix 40
40
E
220 225Right-handed alpha
Helix 41
41
E
237 241Right-handed 310
Helix 42
42
E
242 257Right-handed alpha
Helix 43
43
E
258 261Right-handed 310
Helix 44
44
E
262 269Right-handed alpha
Helix 45
45
E
292 313Right-handed alpha
Helix 46
46
E
317 321Right-handed 310
Helix 47
47
E
339 348Right-handed alpha
Helix 48
48
E
349 351Right-handed 310
Helix 49
49
E
393 402Right-handed alpha
Helix 50
50
E
406 408Right-handed 310
Helix 51
51
E
409 422Right-handed alpha
Helix 52
52
E
425 438Right-handed alpha
Helix 53
53
E
441 445Right-handed 310
Helix 54
54
E
449 460Right-handed alpha
Helix 55
55
I
8 13Right-handed 310
Helix 56
56
I
29 32Right-handed 310
Helix 57
57
I
53 59Right-handed alpha
Helix 58
58
I
60 62Right-handed 310
Helix 59
59
I
71 87Right-handed alpha
Helix 60
60
I
96 103Right-handed alpha
Helix 61
61
I
126 131Right-handed alpha
Helix 62
62
I
138 149Right-handed alpha
Helix 63
63
I
165 170Right-handed alpha
Helix 64
64
I
180 201Right-handed alpha
Helix 65
65
I
213 225Right-handed alpha
Helix 66
66
I
237 241Right-handed 310
Helix 67
67
I
242 257Right-handed alpha
Helix 68
68
I
258 261Right-handed 310
Helix 69
69
I
262 269Right-handed alpha
Helix 70
70
I
292 311Right-handed alpha
Helix 71
71
I
317 321Right-handed 310
Helix 72
72
I
339 349Right-handed alpha
Helix 73
73
I
393 402Right-handed alpha
Helix 74
74
I
406 408Right-handed 310
Helix 75
75
I
409 422Right-handed alpha
Helix 76
76
I
425 437Right-handed alpha
Helix 77
77
I
438 439Right-handed 310
Helix 78
78
I
440 444Right-handed 310
Helix 79
79
I
449 461Right-handed alpha
Helix 80
80
M
8 13Right-handed 310
Helix 81
81
M
29 32Right-handed 310
Helix 82
82
M
53 59Right-handed alpha
Helix 83
83
M
60 62Right-handed 310
Helix 84
84
M
71 85Right-handed alpha
Helix 85
85
M
86 89Right-handed 310
Helix 86
86
M
96 103Right-handed alpha
Helix 87
87
M
126 131Right-handed alpha
Helix 88
88
M
138 149Right-handed alpha
Helix 89
89
M
165 170Right-handed alpha
Helix 90
90
M
180 201Right-handed alpha
Helix 91
91
M
213 225Right-handed alpha
Helix 92
92
M
236 241Right-handed alpha
Helix 93
93
M
242 257Right-handed alpha
Helix 94
94
M
258 261Right-handed 310
Helix 95
95
M
262 269Right-handed alpha
Helix 96
96
M
292 311Right-handed alpha
Helix 97
97
M
317 321Right-handed 310
Helix 98
98
M
339 349Right-handed alpha
Helix 99
99
M
393 402Right-handed alpha
Helix 100
100
M
406 408Right-handed 310
Helix 101
101
M
409 422Right-handed alpha
Helix 102
102
M
425 438Right-handed alpha
Helix 103
103
M
439 444Right-handed 310
Helix 104
104
M
449 460Right-handed alpha
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There are 20 sheets in PDB entry 3OL8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 8first strand
Strand 2
A
278 283anti-parallel
Strand 3
A
270 275anti-parallel
Strand 4
A
154 158parallel
Strand 5
A
175 178anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 27first strand
Strand 2
A
403 404anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 40first strand
Strand 2
A
162 163anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 326first strand
Strand 2
A
329 334anti-parallel
Strand 3
A
228 234anti-parallel
Strand 4
A
354 355anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 373first strand
Strand 2
A
376 380anti-parallel
Strand 3
A
388 391anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
2 8first strand
Strand 2
E
278 283anti-parallel
Strand 3
E
270 275anti-parallel
Strand 4
E
154 158parallel
Strand 5
E
175 178anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
26 27first strand
Strand 2
E
403 404anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
39 40first strand
Strand 2
E
162 163anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
322 326first strand
Strand 2
E
329 334anti-parallel
Strand 3
E
228 234anti-parallel
Strand 4
E
354 355anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
372 373first strand
Strand 2
E
376 380anti-parallel
Strand 3
E
388 391anti-parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
2 3first strand
Strand 2
I
278 283anti-parallel
Strand 3
I
270 275anti-parallel
Strand 4
I
154 158parallel
Strand 5
I
175 178anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
26 27first strand
Strand 2
I
403 404anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
39 40first strand
Strand 2
I
162 163anti-parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
228 232first strand
Strand 2
I
329 334anti-parallel
Strand 3
I
322 326anti-parallel
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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
372 373first strand
Strand 2
I
376 380anti-parallel
Strand 3
I
388 391anti-parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
2 6first strand
Strand 2
M
278 283anti-parallel
Strand 3
M
270 275anti-parallel
Strand 4
M
154 158parallel
Strand 5
M
175 178anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
26 27first strand
Strand 2
M
403 404anti-parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
39 40first strand
Strand 2
M
162 163anti-parallel
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There are 3 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
228 232first strand
Strand 2
M
329 334anti-parallel
Strand 3
M
322 326anti-parallel
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There are 3 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
372 373first strand
Strand 2
M
376 380anti-parallel
Strand 3
M
388 391anti-parallel
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