Analysis of interatomic Contacts of Structural Units in PDB entry:
3OLA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OLA entry

There are 9 chains in PDB entry 3OLA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1PHE 461
B
 C 596 G 612
C
 G 688 C 702
D
 G 805 A 807
E
 GLY 1PHE 461
F
 C 596 G 612
G
 G 688 C 702
H
 G 805 A 807
I
 GLY 1GLU 140
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 91 helices in PDB entry 3OLA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 13Right-handed 310
Helix 2
2
A
53 59Right-handed alpha
Helix 3
3
A
71 86Right-handed alpha
Helix 4
4
A
87 89Right-handed 310
Helix 5
5
A
96 103Right-handed alpha
Helix 6
6
A
126 131Right-handed alpha
Helix 7
7
A
138 149Right-handed alpha
Helix 8
8
A
165 170Right-handed alpha
Helix 9
9
A
180 201Right-handed alpha
Helix 10
10
A
213 218Right-handed alpha
Helix 11
11
A
242 257Right-handed alpha
Helix 12
12
A
258 261Right-handed 310
Helix 13
13
A
262 269Right-handed alpha
Helix 14
14
A
292 313Right-handed alpha
Helix 15
15
A
317 321Right-handed 310
Helix 16
16
A
339 349Right-handed alpha
Helix 17
17
A
356 360Right-handed 310
Helix 18
18
A
393 402Right-handed alpha
Helix 19
19
A
406 408Right-handed 310
Helix 20
20
A
409 422Right-handed alpha
Helix 21
21
A
425 438Right-handed alpha
Helix 22
22
A
439 445Right-handed 310
Helix 23
23
A
449 461Right-handed alpha
Helix 24
24
E
8 13Right-handed 310
Helix 25
25
E
53 59Right-handed alpha
Helix 26
26
E
71 87Right-handed alpha
Helix 27
27
E
96 103Right-handed alpha
Helix 28
28
E
126 131Right-handed alpha
Helix 29
29
E
138 149Right-handed alpha
Helix 30
30
E
165 170Right-handed alpha
Helix 31
31
E
180 201Right-handed alpha
Helix 32
32
E
213 218Right-handed alpha
Helix 33
33
E
242 257Right-handed alpha
Helix 34
34
E
258 261Right-handed 310
Helix 35
35
E
262 269Right-handed alpha
Helix 36
36
E
292 313Right-handed alpha
Helix 37
37
E
317 321Right-handed 310
Helix 38
38
E
339 349Right-handed alpha
Helix 39
39
E
356 360Right-handed 310
Helix 40
40
E
393 402Right-handed alpha
Helix 41
41
E
406 408Right-handed 310
Helix 42
42
E
409 422Right-handed alpha
Helix 43
43
E
425 438Right-handed alpha
Helix 44
44
E
439 445Right-handed 310
Helix 45
45
E
449 461Right-handed alpha
Helix 46
46
I
8 13Right-handed alpha
Helix 47
47
I
53 59Right-handed alpha
Helix 48
48
I
71 87Right-handed alpha
Helix 49
49
I
96 103Right-handed alpha
Helix 50
50
I
119 124Right-handed alpha
Helix 51
51
I
126 131Right-handed alpha
Helix 52
52
I
138 149Right-handed alpha
Helix 53
53
I
165 170Right-handed alpha
Helix 54
54
I
180 201Right-handed alpha
Helix 55
55
I
213 218Right-handed alpha
Helix 56
56
I
220 225Right-handed alpha
Helix 57
57
I
242 257Right-handed alpha
Helix 58
58
I
258 261Right-handed 310
Helix 59
59
I
262 269Right-handed alpha
Helix 60
60
I
292 312Right-handed alpha
Helix 61
61
I
317 321Right-handed 310
Helix 62
62
I
339 347Right-handed alpha
Helix 63
63
I
393 402Right-handed alpha
Helix 64
64
I
406 408Right-handed 310
Helix 65
65
I
409 422Right-handed alpha
Helix 66
66
I
425 438Right-handed alpha
Helix 67
67
I
439 444Right-handed alpha
Helix 68
68
I
449 461Right-handed alpha
Helix 69
69
M
8 13Right-handed alpha
Helix 70
70
M
53 59Right-handed alpha
Helix 71
71
M
71 87Right-handed alpha
Helix 72
72
M
96 103Right-handed alpha
Helix 73
73
M
119 124Right-handed alpha
Helix 74
74
M
126 131Right-handed alpha
Helix 75
75
M
138 149Right-handed alpha
Helix 76
76
M
165 170Right-handed alpha
Helix 77
77
M
180 201Right-handed alpha
Helix 78
78
M
213 218Right-handed alpha
Helix 79
79
M
220 225Right-handed alpha
Helix 80
80
M
242 257Right-handed alpha
Helix 81
81
M
258 261Right-handed 310
Helix 82
82
M
262 269Right-handed alpha
Helix 83
83
M
292 312Right-handed alpha
Helix 84
84
M
317 321Right-handed 310
Helix 85
85
M
339 347Right-handed alpha
Helix 86
86
M
393 402Right-handed alpha
Helix 87
87
M
406 408Right-handed 310
Helix 88
88
M
409 422Right-handed alpha
Helix 89
89
M
425 438Right-handed alpha
Helix 90
90
M
439 444Right-handed alpha
Helix 91
91
M
449 461Right-handed alpha
Back to top of page

There are 24 sheets in PDB entry 3OLA. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 5first strand
Strand 2
A
280 283anti-parallel
Strand 3
A
270 274anti-parallel
Strand 4
A
154 158parallel
Strand 5
A
175 178anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 27first strand
Strand 2
A
403 404anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 40first strand
Strand 2
A
162 164anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
228 230first strand
Strand 2
A
329 334anti-parallel
Strand 3
A
322 326anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 234first strand
Strand 2
A
354 355anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
377 380first strand
Strand 2
A
388 391anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
3 5first strand
Strand 2
E
280 283anti-parallel
Strand 3
E
270 274anti-parallel
Strand 4
E
154 158parallel
Strand 5
E
175 178anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
26 27first strand
Strand 2
E
403 404anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
38 40first strand
Strand 2
E
162 164anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
228 230first strand
Strand 2
E
329 334anti-parallel
Strand 3
E
322 326anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
233 234first strand
Strand 2
E
354 355anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
377 380first strand
Strand 2
E
388 391anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
2 6first strand
Strand 2
I
278 283anti-parallel
Strand 3
I
270 275anti-parallel
Strand 4
I
154 158parallel
Strand 5
I
175 178anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
26 27first strand
Strand 2
I
403 404anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
39 40first strand
Strand 2
I
162 163anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
228 230first strand
Strand 2
I
329 334anti-parallel
Strand 3
I
322 326anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
232 234first strand
Strand 2
I
354 356anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
377 380first strand
Strand 2
I
388 391anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
2 6first strand
Strand 2
M
278 283anti-parallel
Strand 3
M
270 275anti-parallel
Strand 4
M
154 158parallel
Strand 5
M
175 178anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
26 27first strand
Strand 2
M
403 404anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
39 40first strand
Strand 2
M
162 163anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
228 230first strand
Strand 2
M
329 334anti-parallel
Strand 3
M
322 326anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
232 234first strand
Strand 2
M
354 356anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
377 380first strand
Strand 2
M
388 391anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il