Analysis of interatomic Contacts of Structural Units in PDB entry:
3OLC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OLC entry

There is 1 chain in PDB entry 3OLC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
X
 GLU 7PRO 286
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 3OLC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
X
20 34Right-handed alpha
Helix 2
2
X
35 37Right-handed 310
Helix 3
3
X
44 48Right-handed alpha
Helix 4
4
X
65 75Right-handed alpha
Helix 5
5
X
80 90Right-handed alpha
Helix 6
6
X
117 131Right-handed alpha
Helix 7
7
X
153 162Right-handed alpha
Helix 8
8
X
168 181Right-handed alpha
Helix 9
9
X
186 190Right-handed 310
Helix 10
10
X
191 196Right-handed 310
Helix 11
11
X
211 225Right-handed alpha
Helix 12
12
X
248 257Right-handed alpha
Helix 13
13
X
263 274Right-handed alpha
Helix 14
14
X
278 282Right-handed 310
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There are 3 sheets in PDB entry 3OLC. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
39 43first strand
Strand 2
X
11 15parallel
Strand 3
X
57 59parallel
Strand 4
X
77 79parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
134 135first strand
Strand 2
X
110 114parallel
Strand 3
X
145 148parallel
Strand 4
X
166 167parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
228 229first strand
Strand 2
X
204 207parallel
Strand 3
X
240 242parallel
Strand 4
X
260 262parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il