Analysis of interatomic Contacts of Structural Units in PDB entry:
3OM2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OM2 entry

There is 1 chain in PDB entry 3OM2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 34VAL 481
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 3OM2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
47 52Right-handed alpha
Helix 2
2
A
53 58Right-handed alpha
Helix 3
3
A
69 73Right-handed 310
Helix 4
4
A
141 145Right-handed 310
Helix 5
5
A
153 159Right-handed 310
Helix 6
6
A
164 168Right-handed 310
Helix 7
7
A
237 245Right-handed alpha
Helix 8
8
A
246 250Right-handed 310
Helix 9
9
A
283 293Right-handed 310
Helix 10
10
A
296 310Right-handed alpha
Helix 11
11
A
312 319Right-handed alpha
Helix 12
12
A
372 374Right-handed 310
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There are 8 sheets in PDB entry 3OM2. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 45first strand
Strand 2
A
342 343parallel
Strand 3
A
321 328anti-parallel
Strand 4
A
266 274anti-parallel
Strand 5
A
256 263anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 45first strand
Strand 2
A
342 343parallel
Strand 3
A
321 328anti-parallel
Strand 4
A
334 337anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 82first strand
Strand 2
A
88 90anti-parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 150first strand
Strand 2
A
129 136anti-parallel
Strand 3
A
112 120anti-parallel
Strand 4
A
92 100anti-parallel
Strand 5
A
170 178parallel
Strand 6
A
184 192anti-parallel
Strand 7
A
198 212anti-parallel
Strand 8
A
215 228anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
352 359first strand
Strand 2
A
362 370anti-parallel
Strand 3
A
384 391anti-parallel
Strand 4
A
399 400anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
352 359first strand
Strand 2
A
362 370anti-parallel
Strand 3
A
384 391anti-parallel
Strand 4
A
406 410anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
420 426first strand
Strand 2
A
433 440anti-parallel
Strand 3
A
452 453anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
420 426first strand
Strand 2
A
433 440anti-parallel
Strand 3
A
457 462anti-parallel
Strand 4
A
465 468anti-parallel
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