Analysis of interatomic Contacts of Structural Units in PDB entry:
3OML


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OML entry

There is 1 chain in PDB entry 3OML (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 8LYS 592
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 3OML. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 35Right-handed alpha
Helix 2
2
A
57 68Right-handed alpha
Helix 3
3
A
78 80Right-handed 310
Helix 4
4
A
81 87Right-handed alpha
Helix 5
5
A
115 143Right-handed alpha
Helix 6
6
A
154 160Right-handed alpha
Helix 7
7
A
164 186Right-handed alpha
Helix 8
8
A
209 214Right-handed alpha
Helix 9
9
A
215 216Right-handed 310
Helix 10
10
A
217 220Right-handed 310
Helix 11
11
A
221 228Right-handed alpha
Helix 12
12
A
269 276Right-handed alpha
Helix 13
13
A
276 281Right-handed alpha
Helix 14
14
A
291 308Right-handed alpha
Helix 15
15
A
321 332Right-handed alpha
Helix 16
16
A
338 340Right-handed 310
Helix 17
17
A
341 346Right-handed alpha
Helix 18
18
A
355 359Right-handed 310
Helix 19
19
A
360 370Right-handed alpha
Helix 20
20
A
486 492Right-handed alpha
Helix 21
21
A
493 495Right-handed 310
Helix 22
22
A
498 502Right-handed 310
Helix 23
23
A
503 510Right-handed alpha
Helix 24
24
A
518 535Right-handed alpha
Helix 25
25
A
538 540Right-handed 310
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There are 2 sheets in PDB entry 3OML. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 74first strand
Strand 2
A
38 41parallel
Strand 3
A
14 17parallel
Strand 4
A
99 100parallel
Strand 5
A
147 152parallel
Strand 6
A
190 197parallel
Strand 7
A
239 243parallel
Strand 8
A
246 250anti-parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
314 320first strand
Strand 2
A
405 418anti-parallel
Strand 3
A
423 432anti-parallel
Strand 4
A
438 448anti-parallel
Strand 5
A
389 397anti-parallel
Strand 6
A
542 549anti-parallel
Strand 7
A
582 591anti-parallel
Strand 8
A
569 576anti-parallel
Strand 9
A
558 566anti-parallel
Strand 10
A
477 482anti-parallel
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