Analysis of interatomic Contacts of Structural Units in PDB entry:
3OOH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3OOH entry

There are 18 chains in PDB entry 3OOH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 1	LYS 237
B	ALA 1	LYS 237
C	ALA 1	LYS 237
D	ALA 1	LYS 237
E	ALA 1	LYS 237
F	ALA 1	LYS 237
G	ALA 1	LYS 237
H	ALA 1	LYS 237
I	ALA 1	LYS 237
J	ALA 1	LYS 237
K	ALA 1	LYS 237
L	ALA 1	LYS 237
M	ALA 1	LYS 237
N	ALA 1	LYS 237
O	ALA 1	LYS 237
P	ALA 1	LYS 237
Q	ALA 1	LYS 237
R	ALA 1	LYS 237

There are151 helices in PDB entry 3OOH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	21	32	Right-handed alpha
Helix 2	2	A	41	45	Right-handed 310
Helix 3	3	A	65	80	Right-handed alpha
Helix 4	4	A	114	120	Right-handed alpha
Helix 5	5	A	130	144	Right-handed alpha
Helix 6	6	A	164	173	Right-handed alpha
Helix 7	7	A	181	192	Right-handed alpha
Helix 8	8	A	213	220	Right-handed alpha
Helix 9	9	A	221	236	Right-handed alpha
Helix 10	10	B	21	33	Right-handed alpha
Helix 11	11	B	41	45	Right-handed 310
Helix 12	12	B	65	80	Right-handed alpha
Helix 13	13	B	114	120	Right-handed alpha
Helix 14	14	B	130	143	Right-handed alpha
Helix 15	15	B	165	173	Right-handed alpha
Helix 16	16	B	181	192	Right-handed alpha
Helix 17	17	B	213	236	Right-handed alpha
Helix 18	18	C	21	32	Right-handed alpha
Helix 19	19	C	41	45	Right-handed 310
Helix 20	20	C	65	79	Right-handed alpha
Helix 21	21	C	114	120	Right-handed alpha
Helix 22	22	C	130	144	Right-handed alpha
Helix 23	23	C	164	173	Right-handed alpha
Helix 24	24	C	181	192	Right-handed alpha
Helix 25	25	C	213	237	Right-handed alpha
Helix 26	26	D	21	33	Right-handed alpha
Helix 27	27	D	41	45	Right-handed 310
Helix 28	28	D	65	79	Right-handed alpha
Helix 29	29	D	114	120	Right-handed alpha
Helix 30	30	D	130	144	Right-handed alpha
Helix 31	31	D	165	173	Right-handed alpha
Helix 32	32	D	181	192	Right-handed alpha
Helix 33	33	D	213	218	Right-handed alpha
Helix 34	34	D	218	237	Right-handed alpha
Helix 35	35	E	21	33	Right-handed alpha
Helix 36	36	E	41	45	Right-handed 310
Helix 37	37	E	65	80	Right-handed alpha
Helix 38	38	E	114	120	Right-handed alpha
Helix 39	39	E	130	144	Right-handed alpha
Helix 40	40	E	165	173	Right-handed alpha
Helix 41	41	E	181	193	Right-handed alpha
Helix 42	42	E	213	237	Right-handed alpha
Helix 43	43	F	21	33	Right-handed alpha
Helix 44	44	F	41	45	Right-handed 310
Helix 45	45	F	65	80	Right-handed alpha
Helix 46	46	F	114	120	Right-handed alpha
Helix 47	47	F	130	145	Right-handed alpha
Helix 48	48	F	164	173	Right-handed alpha
Helix 49	49	F	181	193	Right-handed alpha
Helix 50	50	F	213	220	Right-handed alpha
Helix 51	51	F	221	235	Right-handed alpha
Helix 52	52	G	21	32	Right-handed alpha
Helix 53	53	G	41	45	Right-handed 310
Helix 54	54	G	65	80	Right-handed alpha
Helix 55	55	G	114	120	Right-handed alpha
Helix 56	56	G	130	143	Right-handed alpha
Helix 57	57	G	164	173	Right-handed alpha
Helix 58	58	G	181	192	Right-handed alpha
Helix 59	59	G	213	220	Right-handed alpha
Helix 60	60	G	221	236	Right-handed alpha
Helix 61	61	H	21	32	Right-handed alpha
Helix 62	62	H	41	45	Right-handed 310
Helix 63	63	H	65	80	Right-handed alpha
Helix 64	64	H	114	120	Right-handed alpha
Helix 65	65	H	130	144	Right-handed alpha
Helix 66	66	H	165	173	Right-handed alpha
Helix 67	67	H	181	192	Right-handed alpha
Helix 68	68	H	213	236	Right-handed alpha
Helix 69	69	I	21	33	Right-handed alpha
Helix 70	70	I	41	45	Right-handed 310
Helix 71	71	I	65	81	Right-handed alpha
Helix 72	72	I	114	120	Right-handed alpha
Helix 73	73	I	130	144	Right-handed alpha
Helix 74	74	I	164	173	Right-handed alpha
Helix 75	75	I	181	192	Right-handed alpha
Helix 76	76	I	213	236	Right-handed alpha
Helix 77	77	J	21	33	Right-handed alpha
Helix 78	78	J	41	45	Right-handed 310
Helix 79	79	J	65	79	Right-handed alpha
Helix 80	80	J	114	120	Right-handed alpha
Helix 81	81	J	130	143	Right-handed alpha
Helix 82	82	J	165	173	Right-handed alpha
Helix 83	83	J	181	192	Right-handed alpha
Helix 84	84	J	213	236	Right-handed alpha
Helix 85	85	K	21	33	Right-handed alpha
Helix 86	86	K	41	45	Right-handed 310
Helix 87	87	K	65	80	Right-handed alpha
Helix 88	88	K	114	120	Right-handed alpha
Helix 89	89	K	130	143	Right-handed alpha
Helix 90	90	K	165	173	Right-handed alpha
Helix 91	91	K	181	192	Right-handed alpha
Helix 92	92	K	213	236	Right-handed alpha
Helix 93	93	L	21	32	Right-handed alpha
Helix 94	94	L	41	45	Right-handed 310
Helix 95	95	L	65	80	Right-handed alpha
Helix 96	96	L	114	120	Right-handed alpha
Helix 97	97	L	130	145	Right-handed alpha
Helix 98	98	L	165	173	Right-handed alpha
Helix 99	99	L	181	193	Right-handed alpha
Helix 100	100	L	213	220	Right-handed alpha
Helix 101	101	L	221	237	Right-handed alpha
Helix 102	102	M	21	32	Right-handed alpha
Helix 103	103	M	41	45	Right-handed 310
Helix 104	104	M	65	80	Right-handed alpha
Helix 105	105	M	114	120	Right-handed alpha
Helix 106	106	M	130	144	Right-handed alpha
Helix 107	107	M	164	173	Right-handed alpha
Helix 108	108	M	181	192	Right-handed alpha
Helix 109	109	M	213	220	Right-handed alpha
Helix 110	110	M	221	236	Right-handed alpha
Helix 111	111	N	21	33	Right-handed alpha
Helix 112	112	N	41	45	Right-handed 310
Helix 113	113	N	65	80	Right-handed alpha
Helix 114	114	N	114	120	Right-handed alpha
Helix 115	115	N	130	144	Right-handed alpha
Helix 116	116	N	164	173	Right-handed alpha
Helix 117	117	N	181	192	Right-handed alpha
Helix 118	118	N	218	236	Right-handed alpha
Helix 119	119	O	21	33	Right-handed alpha
Helix 120	120	O	41	45	Right-handed 310
Helix 121	121	O	65	81	Right-handed alpha
Helix 122	122	O	114	120	Right-handed alpha
Helix 123	123	O	130	144	Right-handed alpha
Helix 124	124	O	164	173	Right-handed alpha
Helix 125	125	O	181	192	Right-handed alpha
Helix 126	126	O	213	236	Right-handed alpha
Helix 127	127	P	21	32	Right-handed alpha
Helix 128	128	P	41	45	Right-handed 310
Helix 129	129	P	65	81	Right-handed alpha
Helix 130	130	P	114	120	Right-handed alpha
Helix 131	131	P	130	145	Right-handed alpha
Helix 132	132	P	165	173	Right-handed alpha
Helix 133	133	P	181	192	Right-handed alpha
Helix 134	134	P	213	236	Right-handed alpha
Helix 135	135	Q	21	33	Right-handed alpha
Helix 136	136	Q	41	45	Right-handed 310
Helix 137	137	Q	65	80	Right-handed alpha
Helix 138	138	Q	114	120	Right-handed alpha
Helix 139	139	Q	130	145	Right-handed alpha
Helix 140	140	Q	165	173	Right-handed alpha
Helix 141	141	Q	181	192	Right-handed alpha
Helix 142	142	Q	215	237	Right-handed alpha
Helix 143	143	R	21	32	Right-handed alpha
Helix 144	144	R	41	45	Right-handed 310
Helix 145	145	R	65	80	Right-handed alpha
Helix 146	146	R	114	120	Right-handed alpha
Helix 147	147	R	130	145	Right-handed alpha
Helix 148	148	R	165	173	Right-handed alpha
Helix 149	149	R	181	192	Right-handed alpha
Helix 150	150	R	213	220	Right-handed alpha
Helix 151	151	R	222	237	Right-handed alpha

There are 26 sheets in PDB entry 3OOH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	34	40	first strand
Strand 2	A	47	52	anti-parallel
Strand 3	A	55	60	anti-parallel
Strand 4	A	15	18	parallel
Strand 5	A	84	93	parallel
Strand 6	A	195	205	parallel
Strand 7	A	103	111	anti-parallel
Strand 8	A	148	155	parallel
Strand 9	A	177	179	parallel
Strand 10	A	84	93	anti-parallel

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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	34	40	first strand
Strand 2	B	47	52	anti-parallel
Strand 3	B	55	60	anti-parallel
Strand 4	B	15	18	parallel
Strand 5	B	84	93	parallel
Strand 6	B	177	179	anti-parallel
Strand 7	B	148	155	parallel
Strand 8	B	103	111	parallel
Strand 9	B	195	205	anti-parallel
Strand 10	B	210	211	anti-parallel

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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	34	40	first strand
Strand 2	B	47	52	anti-parallel
Strand 3	B	55	60	anti-parallel
Strand 4	B	15	18	parallel
Strand 5	B	84	93	parallel
Strand 6	B	195	205	parallel
Strand 7	B	210	211	anti-parallel

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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	34	40	first strand
Strand 2	C	47	52	anti-parallel
Strand 3	C	55	60	anti-parallel
Strand 4	C	15	18	parallel
Strand 5	C	84	93	parallel
Strand 6	C	177	179	anti-parallel
Strand 7	C	148	155	parallel
Strand 8	C	103	111	parallel
Strand 9	C	127	128	anti-parallel

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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	34	40	first strand
Strand 2	C	47	52	anti-parallel
Strand 3	C	55	60	anti-parallel
Strand 4	C	15	18	parallel
Strand 5	C	84	93	parallel
Strand 6	C	195	205	parallel
Strand 7	C	210	211	anti-parallel

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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	127	128	first strand
Strand 2	C	103	111	anti-parallel
Strand 3	C	195	205	anti-parallel
Strand 4	C	210	211	anti-parallel

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There are 10 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	34	40	first strand
Strand 2	D	47	52	anti-parallel
Strand 3	D	55	60	anti-parallel
Strand 4	D	15	18	parallel
Strand 5	D	84	93	parallel
Strand 6	D	195	205	parallel
Strand 7	D	103	111	anti-parallel
Strand 8	D	148	155	parallel
Strand 9	D	177	179	parallel
Strand 10	D	84	93	anti-parallel

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There are 10 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	34	40	first strand
Strand 2	E	47	52	anti-parallel
Strand 3	E	55	60	anti-parallel
Strand 4	E	15	18	parallel
Strand 5	E	84	93	parallel
Strand 6	E	195	205	parallel
Strand 7	E	103	111	anti-parallel
Strand 8	E	148	155	parallel
Strand 9	E	177	179	parallel
Strand 10	E	84	93	anti-parallel

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There are 10 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	34	40	first strand
Strand 2	F	47	52	anti-parallel
Strand 3	F	55	60	anti-parallel
Strand 4	F	15	18	parallel
Strand 5	F	84	93	parallel
Strand 6	F	195	205	parallel
Strand 7	F	103	111	anti-parallel
Strand 8	F	148	155	parallel
Strand 9	F	177	179	parallel
Strand 10	F	84	93	anti-parallel

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There are 10 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	34	40	first strand
Strand 2	G	47	52	anti-parallel
Strand 3	G	55	60	anti-parallel
Strand 4	G	15	18	parallel
Strand 5	G	84	93	parallel
Strand 6	G	195	205	parallel
Strand 7	G	103	111	anti-parallel
Strand 8	G	149	155	parallel
Strand 9	G	177	179	parallel
Strand 10	G	84	93	anti-parallel

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There are 10 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	34	40	first strand
Strand 2	H	47	52	anti-parallel
Strand 3	H	55	60	anti-parallel
Strand 4	H	15	18	parallel
Strand 5	H	84	93	parallel
Strand 6	H	195	205	parallel
Strand 7	H	103	111	anti-parallel
Strand 8	H	148	155	parallel
Strand 9	H	177	179	parallel
Strand 10	H	84	93	anti-parallel

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There are 10 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	34	40	first strand
Strand 2	I	47	52	anti-parallel
Strand 3	I	55	60	anti-parallel
Strand 4	I	15	18	parallel
Strand 5	I	84	93	parallel
Strand 6	I	195	205	parallel
Strand 7	I	103	111	anti-parallel
Strand 8	I	149	155	parallel
Strand 9	I	177	179	parallel
Strand 10	I	84	93	anti-parallel

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There are 9 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	34	40	first strand
Strand 2	J	47	52	anti-parallel
Strand 3	J	55	60	anti-parallel
Strand 4	J	15	18	parallel
Strand 5	J	84	93	parallel
Strand 6	J	177	179	anti-parallel
Strand 7	J	149	155	parallel
Strand 8	J	103	111	parallel
Strand 9	J	127	128	anti-parallel

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There are 8 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	34	40	first strand
Strand 2	J	47	52	anti-parallel
Strand 3	J	55	60	anti-parallel
Strand 4	J	15	18	parallel
Strand 5	J	84	93	parallel
Strand 6	J	195	205	parallel
Strand 7	J	103	111	anti-parallel
Strand 8	J	127	128	anti-parallel

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There are 10 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	34	40	first strand
Strand 2	K	47	52	anti-parallel
Strand 3	K	55	60	anti-parallel
Strand 4	K	15	18	parallel
Strand 5	K	84	93	parallel
Strand 6	K	195	205	parallel
Strand 7	K	103	111	anti-parallel
Strand 8	K	149	155	parallel
Strand 9	K	177	179	parallel
Strand 10	K	84	93	anti-parallel

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There are 10 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	34	40	first strand
Strand 2	L	47	52	anti-parallel
Strand 3	L	55	60	anti-parallel
Strand 4	L	15	18	parallel
Strand 5	L	84	93	parallel
Strand 6	L	195	205	parallel
Strand 7	L	103	111	anti-parallel
Strand 8	L	148	155	parallel
Strand 9	L	177	179	parallel
Strand 10	L	84	93	anti-parallel

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There are 10 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	38	40	first strand
Strand 2	M	47	52	anti-parallel
Strand 3	M	55	60	anti-parallel
Strand 4	M	15	18	parallel
Strand 5	M	84	93	parallel
Strand 6	M	195	205	parallel
Strand 7	M	103	111	anti-parallel
Strand 8	M	148	155	parallel
Strand 9	M	175	179	parallel
Strand 10	M	84	93	anti-parallel

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There are 10 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	34	40	first strand
Strand 2	N	47	52	anti-parallel
Strand 3	N	55	60	anti-parallel
Strand 4	N	15	18	parallel
Strand 5	N	84	93	parallel
Strand 6	N	177	179	anti-parallel
Strand 7	N	148	155	parallel
Strand 8	N	103	111	parallel
Strand 9	N	195	205	anti-parallel
Strand 10	N	210	211	anti-parallel

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There are 7 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	34	40	first strand
Strand 2	N	47	52	anti-parallel
Strand 3	N	55	60	anti-parallel
Strand 4	N	15	18	parallel
Strand 5	N	84	93	parallel
Strand 6	N	195	205	parallel
Strand 7	N	210	211	anti-parallel

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There are 10 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	34	40	first strand
Strand 2	O	47	52	anti-parallel
Strand 3	O	55	60	anti-parallel
Strand 4	O	15	18	parallel
Strand 5	O	84	93	parallel
Strand 6	O	177	179	anti-parallel
Strand 7	O	148	155	parallel
Strand 8	O	103	111	parallel
Strand 9	O	195	205	anti-parallel
Strand 10	O	210	211	anti-parallel

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There are 7 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	34	40	first strand
Strand 2	O	47	52	anti-parallel
Strand 3	O	55	60	anti-parallel
Strand 4	O	15	18	parallel
Strand 5	O	84	93	parallel
Strand 6	O	195	205	parallel
Strand 7	O	210	211	anti-parallel

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There are 9 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	34	40	first strand
Strand 2	P	47	52	anti-parallel
Strand 3	P	55	60	anti-parallel
Strand 4	P	15	18	parallel
Strand 5	P	84	93	parallel
Strand 6	P	177	179	anti-parallel
Strand 7	P	148	155	parallel
Strand 8	P	103	111	parallel
Strand 9	P	127	128	anti-parallel

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There are 8 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	34	40	first strand
Strand 2	P	47	52	anti-parallel
Strand 3	P	55	60	anti-parallel
Strand 4	P	15	18	parallel
Strand 5	P	84	93	parallel
Strand 6	P	195	205	parallel
Strand 7	P	103	111	anti-parallel
Strand 8	P	127	128	anti-parallel

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There are 10 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	34	40	first strand
Strand 2	Q	47	52	anti-parallel
Strand 3	Q	55	60	anti-parallel
Strand 4	Q	15	19	parallel
Strand 5	Q	84	93	parallel
Strand 6	Q	177	179	anti-parallel
Strand 7	Q	149	155	parallel
Strand 8	Q	103	111	parallel
Strand 9	Q	195	205	anti-parallel
Strand 10	Q	210	211	anti-parallel

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There are 7 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	34	40	first strand
Strand 2	Q	47	52	anti-parallel
Strand 3	Q	55	60	anti-parallel
Strand 4	Q	15	19	parallel
Strand 5	Q	84	93	parallel
Strand 6	Q	195	205	parallel
Strand 7	Q	210	211	anti-parallel

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There are 10 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	34	40	first strand
Strand 2	R	47	52	anti-parallel
Strand 3	R	55	60	anti-parallel
Strand 4	R	15	18	parallel
Strand 5	R	84	93	parallel
Strand 6	R	195	205	parallel
Strand 7	R	103	111	anti-parallel
Strand 8	R	149	155	parallel
Strand 9	R	177	179	parallel
Strand 10	R	84	93	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3OOH

Analysis of interatomic Contacts of Structural Units in PDB entry:
3OOH